Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
Col16a1Q8BLX7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Col16a1Q8BLX7 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Col16a1Q8BLX7 AC153962.1-201ENSMUST00000218530 1948 ntBASIC27.65■■■□□ 2.02
Col16a1Q8BLX7 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC27.65■■■□□ 2.02
Col16a1Q8BLX7 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Col16a1Q8BLX7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Col16a1Q8BLX7 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Col16a1Q8BLX7 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.01
Col16a1Q8BLX7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
Col16a1Q8BLX7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC27.64■■■□□ 2.01
Col16a1Q8BLX7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
Col16a1Q8BLX7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Col16a1Q8BLX7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Col16a1Q8BLX7 Gm10129-202ENSMUST00000193100 1316 ntBASIC27.63■■■□□ 2.01
Col16a1Q8BLX7 Gm7160-202ENSMUST00000188519 1027 ntBASIC27.63■■■□□ 2.01
Col16a1Q8BLX7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Col16a1Q8BLX7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC27.63■■■□□ 2.01
Col16a1Q8BLX7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC27.62■■■□□ 2.01
Col16a1Q8BLX7 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Col16a1Q8BLX7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Col16a1Q8BLX7 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Col16a1Q8BLX7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC27.62■■■□□ 2.01
Col16a1Q8BLX7 AC099934.2-201ENSMUST00000196389 70 ntBASIC27.62■■■□□ 2.01
Col16a1Q8BLX7 AC156953.1-201ENSMUST00000196953 70 ntBASIC27.62■■■□□ 2.01
Col16a1Q8BLX7 AC157822.2-201ENSMUST00000200291 70 ntBASIC27.62■■■□□ 2.01
Col16a1Q8BLX7 Gm43060-201ENSMUST00000200621 289 ntBASIC27.62■■■□□ 2.01
Col16a1Q8BLX7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC27.62■■■□□ 2.01
Col16a1Q8BLX7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Col16a1Q8BLX7 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC27.62■■■□□ 2.01
Col16a1Q8BLX7 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Col16a1Q8BLX7 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Col16a1Q8BLX7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Col16a1Q8BLX7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Col16a1Q8BLX7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC27.61■■■□□ 2.01
Col16a1Q8BLX7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Col16a1Q8BLX7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC27.61■■■□□ 2.01
Col16a1Q8BLX7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC27.6■■■□□ 2.01
Col16a1Q8BLX7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
Col16a1Q8BLX7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC27.6■■■□□ 2.01
Col16a1Q8BLX7 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC27.6■■■□□ 2.01
Col16a1Q8BLX7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Col16a1Q8BLX7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Col16a1Q8BLX7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
Col16a1Q8BLX7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC27.59■■■□□ 2.01
Col16a1Q8BLX7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Col16a1Q8BLX7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC27.59■■■□□ 2.01
Col16a1Q8BLX7 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC27.59■■■□□ 2.01
Col16a1Q8BLX7 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Col16a1Q8BLX7 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Col16a1Q8BLX7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Col16a1Q8BLX7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
Col16a1Q8BLX7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Col16a1Q8BLX7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Col16a1Q8BLX7 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
Col16a1Q8BLX7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Col16a1Q8BLX7 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC27.57■■■□□ 2
Col16a1Q8BLX7 AC166356.1-201ENSMUST00000228236 1426 ntBASIC27.57■■■□□ 2
Col16a1Q8BLX7 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Col16a1Q8BLX7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC27.57■■■□□ 2
Col16a1Q8BLX7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Col16a1Q8BLX7 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Col16a1Q8BLX7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
Col16a1Q8BLX7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC27.56■■■□□ 2
Col16a1Q8BLX7 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC27.56■■■□□ 2
Col16a1Q8BLX7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Col16a1Q8BLX7 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Col16a1Q8BLX7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC27.56■■■□□ 2
Col16a1Q8BLX7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
Col16a1Q8BLX7 Gm40848-201ENSMUST00000221998 324 ntBASIC27.56■■■□□ 2
Col16a1Q8BLX7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC27.56■■■□□ 2
Col16a1Q8BLX7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Col16a1Q8BLX7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC27.55■■■□□ 2
Col16a1Q8BLX7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Col16a1Q8BLX7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC27.54■■■□□ 2
Col16a1Q8BLX7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC27.54■■■□□ 2
Col16a1Q8BLX7 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC27.53■■■□□ 2
Col16a1Q8BLX7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC27.53■■■□□ 2
Col16a1Q8BLX7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC27.53■■■□□ 2
Col16a1Q8BLX7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC27.53■■■□□ 2
Col16a1Q8BLX7 Gm42642-201ENSMUST00000200683 355 ntBASIC27.53■■■□□ 2
Col16a1Q8BLX7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC27.53■■■□□ 2
Col16a1Q8BLX7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
Col16a1Q8BLX7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Col16a1Q8BLX7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Col16a1Q8BLX7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC27.53■■■□□ 2
Col16a1Q8BLX7 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
Col16a1Q8BLX7 CT025689.6-201ENSMUST00000224991 1104 ntBASIC27.52■■■□□ 2
Col16a1Q8BLX7 AC112142.1-201ENSMUST00000228796 918 ntBASIC27.52■■■□□ 2
Col16a1Q8BLX7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Col16a1Q8BLX7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC27.52■■■□□ 2
Col16a1Q8BLX7 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Col16a1Q8BLX7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
Col16a1Q8BLX7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Col16a1Q8BLX7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Col16a1Q8BLX7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC27.52■■■□□ 2
Col16a1Q8BLX7 Gm42418-201ENSMUST00000182010 1831 ntBASIC27.51■■■□□ 2
Col16a1Q8BLX7 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Col16a1Q8BLX7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Col16a1Q8BLX7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms