Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim23Q8BGX0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trim23Q8BGX0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim23Q8BGX0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim23Q8BGX0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim23Q8BGX0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trim23Q8BGX0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trim23Q8BGX0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim23Q8BGX0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.85■□□□□ 0.77
Trim23Q8BGX0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Trim23Q8BGX0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.84■□□□□ 0.77
Trim23Q8BGX0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim23Q8BGX0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.84■□□□□ 0.77
Trim23Q8BGX0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim23Q8BGX0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim23Q8BGX0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim23Q8BGX0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Trim23Q8BGX0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim23Q8BGX0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim23Q8BGX0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim23Q8BGX0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim23Q8BGX0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim23Q8BGX0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Trim23Q8BGX0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trim23Q8BGX0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim23Q8BGX0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Trim23Q8BGX0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
Trim23Q8BGX0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.82■□□□□ 0.76
Trim23Q8BGX0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.82■□□□□ 0.76
Trim23Q8BGX0 Golgb1-201ENSMUST00000023534 498 ntBASIC19.82■□□□□ 0.76
Trim23Q8BGX0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim23Q8BGX0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim23Q8BGX0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim23Q8BGX0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.81■□□□□ 0.76
Trim23Q8BGX0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim23Q8BGX0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim23Q8BGX0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim23Q8BGX0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim23Q8BGX0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim23Q8BGX0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.81■□□□□ 0.76
Trim23Q8BGX0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.81■□□□□ 0.76
Trim23Q8BGX0 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.81■□□□□ 0.76
Trim23Q8BGX0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.81■□□□□ 0.76
Trim23Q8BGX0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.81■□□□□ 0.76
Trim23Q8BGX0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim23Q8BGX0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Trim23Q8BGX0 Gm13241-201ENSMUST00000094493 780 ntBASIC19.81■□□□□ 0.76
Trim23Q8BGX0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Trim23Q8BGX0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim23Q8BGX0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim23Q8BGX0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim23Q8BGX0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim23Q8BGX0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim23Q8BGX0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim23Q8BGX0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim23Q8BGX0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim23Q8BGX0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim23Q8BGX0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.79■□□□□ 0.76
Trim23Q8BGX0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim23Q8BGX0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.79■□□□□ 0.76
Trim23Q8BGX0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim23Q8BGX0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim23Q8BGX0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Trim23Q8BGX0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.79■□□□□ 0.76
Trim23Q8BGX0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim23Q8BGX0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim23Q8BGX0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim23Q8BGX0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.79■□□□□ 0.76
Trim23Q8BGX0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim23Q8BGX0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
Trim23Q8BGX0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim23Q8BGX0 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.78■□□□□ 0.76
Trim23Q8BGX0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim23Q8BGX0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim23Q8BGX0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim23Q8BGX0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim23Q8BGX0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim23Q8BGX0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.78■□□□□ 0.76
Trim23Q8BGX0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.78■□□□□ 0.76
Trim23Q8BGX0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim23Q8BGX0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim23Q8BGX0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim23Q8BGX0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Trim23Q8BGX0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim23Q8BGX0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim23Q8BGX0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.77■□□□□ 0.76
Trim23Q8BGX0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim23Q8BGX0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim23Q8BGX0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim23Q8BGX0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim23Q8BGX0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim23Q8BGX0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim23Q8BGX0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim23Q8BGX0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Trim23Q8BGX0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim23Q8BGX0 Gm21956-201ENSMUST00000179946 522 ntBASIC19.76■□□□□ 0.75
Trim23Q8BGX0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Trim23Q8BGX0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Trim23Q8BGX0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim23Q8BGX0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms