Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Atg4bQ8BGE6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Atg4bQ8BGE6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atg4bQ8BGE6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atg4bQ8BGE6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atg4bQ8BGE6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atg4bQ8BGE6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.36■□□□□ 0.69
Atg4bQ8BGE6 Gm45102-201ENSMUST00000207427 857 ntBASIC19.36■□□□□ 0.69
Atg4bQ8BGE6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.36■□□□□ 0.69
Atg4bQ8BGE6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atg4bQ8BGE6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atg4bQ8BGE6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atg4bQ8BGE6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.36■□□□□ 0.69
Atg4bQ8BGE6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atg4bQ8BGE6 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atg4bQ8BGE6 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.35■□□□□ 0.69
Atg4bQ8BGE6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atg4bQ8BGE6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atg4bQ8BGE6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Atg4bQ8BGE6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
Atg4bQ8BGE6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atg4bQ8BGE6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atg4bQ8BGE6 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atg4bQ8BGE6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atg4bQ8BGE6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Atg4bQ8BGE6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.35■□□□□ 0.69
Atg4bQ8BGE6 Rps24-207ENSMUST00000224568 714 ntBASIC19.35■□□□□ 0.69
Atg4bQ8BGE6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.35■□□□□ 0.69
Atg4bQ8BGE6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Atg4bQ8BGE6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Atg4bQ8BGE6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atg4bQ8BGE6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Atg4bQ8BGE6 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Atg4bQ8BGE6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Atg4bQ8BGE6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Atg4bQ8BGE6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atg4bQ8BGE6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Atg4bQ8BGE6 Gm14117-201ENSMUST00000122417 843 ntBASIC19.34■□□□□ 0.69
Atg4bQ8BGE6 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.34■□□□□ 0.69
Atg4bQ8BGE6 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Atg4bQ8BGE6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Atg4bQ8BGE6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.33■□□□□ 0.69
Atg4bQ8BGE6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Atg4bQ8BGE6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atg4bQ8BGE6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atg4bQ8BGE6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atg4bQ8BGE6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atg4bQ8BGE6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.33■□□□□ 0.68
Atg4bQ8BGE6 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atg4bQ8BGE6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atg4bQ8BGE6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Atg4bQ8BGE6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atg4bQ8BGE6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Atg4bQ8BGE6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Atg4bQ8BGE6 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Atg4bQ8BGE6 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Atg4bQ8BGE6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atg4bQ8BGE6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atg4bQ8BGE6 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Atg4bQ8BGE6 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Atg4bQ8BGE6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.31■□□□□ 0.68
Atg4bQ8BGE6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atg4bQ8BGE6 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atg4bQ8BGE6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atg4bQ8BGE6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Atg4bQ8BGE6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Atg4bQ8BGE6 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg4bQ8BGE6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Atg4bQ8BGE6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg4bQ8BGE6 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg4bQ8BGE6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg4bQ8BGE6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg4bQ8BGE6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Atg4bQ8BGE6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg4bQ8BGE6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Atg4bQ8BGE6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg4bQ8BGE6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg4bQ8BGE6 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4bQ8BGE6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4bQ8BGE6 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4bQ8BGE6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4bQ8BGE6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4bQ8BGE6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4bQ8BGE6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4bQ8BGE6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Atg4bQ8BGE6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4bQ8BGE6 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Atg4bQ8BGE6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4bQ8BGE6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.29■□□□□ 0.68
Atg4bQ8BGE6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atg4bQ8BGE6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.28■□□□□ 0.68
Atg4bQ8BGE6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atg4bQ8BGE6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Atg4bQ8BGE6 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atg4bQ8BGE6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atg4bQ8BGE6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.28■□□□□ 0.68
Atg4bQ8BGE6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atg4bQ8BGE6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atg4bQ8BGE6 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atg4bQ8BGE6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms