Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Prpf40bQ80W14 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC23.71■■□□□ 1.39
Prpf40bQ80W14 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Prpf40bQ80W14 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC23.7■■□□□ 1.38
Prpf40bQ80W14 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Prpf40bQ80W14 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Prpf40bQ80W14 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC23.7■■□□□ 1.38
Prpf40bQ80W14 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Prpf40bQ80W14 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Prpf40bQ80W14 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Prpf40bQ80W14 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Prpf40bQ80W14 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Prpf40bQ80W14 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Prpf40bQ80W14 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Prpf40bQ80W14 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Prpf40bQ80W14 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Prpf40bQ80W14 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Prpf40bQ80W14 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Prpf40bQ80W14 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Prpf40bQ80W14 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Prpf40bQ80W14 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Prpf40bQ80W14 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Prpf40bQ80W14 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Prpf40bQ80W14 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Prpf40bQ80W14 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC23.67■■□□□ 1.38
Prpf40bQ80W14 Gm7291-201ENSMUST00000199147 382 ntBASIC23.67■■□□□ 1.38
Prpf40bQ80W14 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Prpf40bQ80W14 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Prpf40bQ80W14 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Prpf40bQ80W14 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Prpf40bQ80W14 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Prpf40bQ80W14 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC23.66■■□□□ 1.38
Prpf40bQ80W14 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Prpf40bQ80W14 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
Prpf40bQ80W14 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Prpf40bQ80W14 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC23.66■■□□□ 1.38
Prpf40bQ80W14 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Prpf40bQ80W14 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Prpf40bQ80W14 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Prpf40bQ80W14 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Prpf40bQ80W14 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Prpf40bQ80W14 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Prpf40bQ80W14 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
Prpf40bQ80W14 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Prpf40bQ80W14 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Prpf40bQ80W14 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Prpf40bQ80W14 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC23.65■■□□□ 1.38
Prpf40bQ80W14 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Prpf40bQ80W14 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Prpf40bQ80W14 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Prpf40bQ80W14 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC23.64■■□□□ 1.38
Prpf40bQ80W14 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Prpf40bQ80W14 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
Prpf40bQ80W14 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Prpf40bQ80W14 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
Prpf40bQ80W14 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
Prpf40bQ80W14 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Prpf40bQ80W14 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Prpf40bQ80W14 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Prpf40bQ80W14 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Prpf40bQ80W14 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC23.63■■□□□ 1.37
Prpf40bQ80W14 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Prpf40bQ80W14 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Prpf40bQ80W14 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Prpf40bQ80W14 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.63■■□□□ 1.37
Prpf40bQ80W14 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Prpf40bQ80W14 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Prpf40bQ80W14 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Prpf40bQ80W14 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Prpf40bQ80W14 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
Prpf40bQ80W14 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Prpf40bQ80W14 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC23.62■■□□□ 1.37
Prpf40bQ80W14 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Prpf40bQ80W14 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Prpf40bQ80W14 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Prpf40bQ80W14 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Prpf40bQ80W14 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Prpf40bQ80W14 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Prpf40bQ80W14 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Prpf40bQ80W14 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Prpf40bQ80W14 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Prpf40bQ80W14 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
Prpf40bQ80W14 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC23.6■■□□□ 1.37
Prpf40bQ80W14 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC23.6■■□□□ 1.37
Prpf40bQ80W14 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Prpf40bQ80W14 Gm8493-201ENSMUST00000196881 489 ntBASIC23.6■■□□□ 1.37
Prpf40bQ80W14 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Prpf40bQ80W14 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Prpf40bQ80W14 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
Prpf40bQ80W14 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Prpf40bQ80W14 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Prpf40bQ80W14 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Prpf40bQ80W14 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC23.59■■□□□ 1.37
Prpf40bQ80W14 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Prpf40bQ80W14 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Prpf40bQ80W14 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Prpf40bQ80W14 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC23.59■■□□□ 1.37
Prpf40bQ80W14 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC23.58■■□□□ 1.37
Prpf40bQ80W14 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
Prpf40bQ80W14 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC23.58■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms