Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn4bQ7M729 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Scn4bQ7M729 Gm15820-201ENSMUST00000201566 728 ntBASIC20.02■□□□□ 0.8
Scn4bQ7M729 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scn4bQ7M729 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scn4bQ7M729 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Scn4bQ7M729 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Scn4bQ7M729 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scn4bQ7M729 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn4bQ7M729 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn4bQ7M729 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn4bQ7M729 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn4bQ7M729 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn4bQ7M729 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn4bQ7M729 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn4bQ7M729 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn4bQ7M729 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Scn4bQ7M729 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Scn4bQ7M729 Gm4430-201ENSMUST00000192413 1943 ntBASIC20■□□□□ 0.79
Scn4bQ7M729 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scn4bQ7M729 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20■□□□□ 0.79
Scn4bQ7M729 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scn4bQ7M729 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20■□□□□ 0.79
Scn4bQ7M729 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scn4bQ7M729 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scn4bQ7M729 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Scn4bQ7M729 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn4bQ7M729 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn4bQ7M729 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.98■□□□□ 0.79
Scn4bQ7M729 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn4bQ7M729 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn4bQ7M729 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn4bQ7M729 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.98■□□□□ 0.79
Scn4bQ7M729 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.98■□□□□ 0.79
Scn4bQ7M729 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn4bQ7M729 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn4bQ7M729 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn4bQ7M729 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.98■□□□□ 0.79
Scn4bQ7M729 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn4bQ7M729 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Scn4bQ7M729 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn4bQ7M729 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.97■□□□□ 0.79
Scn4bQ7M729 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Scn4bQ7M729 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn4bQ7M729 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Scn4bQ7M729 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Scn4bQ7M729 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn4bQ7M729 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn4bQ7M729 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn4bQ7M729 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Scn4bQ7M729 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn4bQ7M729 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn4bQ7M729 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn4bQ7M729 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn4bQ7M729 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn4bQ7M729 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn4bQ7M729 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.95■□□□□ 0.78
Scn4bQ7M729 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.95■□□□□ 0.78
Scn4bQ7M729 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.94■□□□□ 0.78
Scn4bQ7M729 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn4bQ7M729 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn4bQ7M729 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn4bQ7M729 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Scn4bQ7M729 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn4bQ7M729 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn4bQ7M729 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn4bQ7M729 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn4bQ7M729 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Scn4bQ7M729 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn4bQ7M729 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn4bQ7M729 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn4bQ7M729 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn4bQ7M729 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn4bQ7M729 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
Scn4bQ7M729 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn4bQ7M729 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn4bQ7M729 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Scn4bQ7M729 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Scn4bQ7M729 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.93■□□□□ 0.78
Scn4bQ7M729 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Scn4bQ7M729 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn4bQ7M729 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn4bQ7M729 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Scn4bQ7M729 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Scn4bQ7M729 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn4bQ7M729 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.92■□□□□ 0.78
Scn4bQ7M729 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn4bQ7M729 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn4bQ7M729 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.91■□□□□ 0.78
Scn4bQ7M729 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn4bQ7M729 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Scn4bQ7M729 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn4bQ7M729 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.91■□□□□ 0.78
Scn4bQ7M729 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.91■□□□□ 0.78
Scn4bQ7M729 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.91■□□□□ 0.78
Scn4bQ7M729 Gm40881-201ENSMUST00000223397 166 ntBASIC19.91■□□□□ 0.78
Scn4bQ7M729 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn4bQ7M729 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Scn4bQ7M729 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn4bQ7M729 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms