Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ssx9Q6XAS3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ssx9Q6XAS3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ssx9Q6XAS3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ssx9Q6XAS3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ssx9Q6XAS3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Ssx9Q6XAS3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ssx9Q6XAS3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ssx9Q6XAS3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.48■□□□□ 0.87
Ssx9Q6XAS3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ssx9Q6XAS3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ssx9Q6XAS3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ssx9Q6XAS3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ssx9Q6XAS3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ssx9Q6XAS3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Ssx9Q6XAS3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ssx9Q6XAS3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ssx9Q6XAS3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ssx9Q6XAS3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ssx9Q6XAS3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ssx9Q6XAS3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ssx9Q6XAS3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ssx9Q6XAS3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ssx9Q6XAS3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Ssx9Q6XAS3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ssx9Q6XAS3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ssx9Q6XAS3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ssx9Q6XAS3 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.46■□□□□ 0.87
Ssx9Q6XAS3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ssx9Q6XAS3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ssx9Q6XAS3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ssx9Q6XAS3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.46■□□□□ 0.87
Ssx9Q6XAS3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ssx9Q6XAS3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.45■□□□□ 0.86
Ssx9Q6XAS3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.45■□□□□ 0.86
Ssx9Q6XAS3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ssx9Q6XAS3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ssx9Q6XAS3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ssx9Q6XAS3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ssx9Q6XAS3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ssx9Q6XAS3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.44■□□□□ 0.86
Ssx9Q6XAS3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ssx9Q6XAS3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.44■□□□□ 0.86
Ssx9Q6XAS3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ssx9Q6XAS3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ssx9Q6XAS3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ssx9Q6XAS3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ssx9Q6XAS3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ssx9Q6XAS3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ssx9Q6XAS3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Ssx9Q6XAS3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ssx9Q6XAS3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Ssx9Q6XAS3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Ssx9Q6XAS3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Ssx9Q6XAS3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Ssx9Q6XAS3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Ssx9Q6XAS3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.42■□□□□ 0.86
Ssx9Q6XAS3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.42■□□□□ 0.86
Ssx9Q6XAS3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ssx9Q6XAS3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ssx9Q6XAS3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ssx9Q6XAS3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ssx9Q6XAS3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ssx9Q6XAS3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ssx9Q6XAS3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ssx9Q6XAS3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ssx9Q6XAS3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Ssx9Q6XAS3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.42■□□□□ 0.86
Ssx9Q6XAS3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ssx9Q6XAS3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ssx9Q6XAS3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Ssx9Q6XAS3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ssx9Q6XAS3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ssx9Q6XAS3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.41■□□□□ 0.86
Ssx9Q6XAS3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ssx9Q6XAS3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ssx9Q6XAS3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ssx9Q6XAS3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ssx9Q6XAS3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Ssx9Q6XAS3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ssx9Q6XAS3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ssx9Q6XAS3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ssx9Q6XAS3 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.4■□□□□ 0.86
Ssx9Q6XAS3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ssx9Q6XAS3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ssx9Q6XAS3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Ssx9Q6XAS3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ssx9Q6XAS3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ssx9Q6XAS3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Ssx9Q6XAS3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.39■□□□□ 0.85
Ssx9Q6XAS3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.39■□□□□ 0.85
Ssx9Q6XAS3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ssx9Q6XAS3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ssx9Q6XAS3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ssx9Q6XAS3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Ssx9Q6XAS3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ssx9Q6XAS3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ssx9Q6XAS3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ssx9Q6XAS3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ssx9Q6XAS3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms