Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Ddx58Q6Q899 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
Ddx58Q6Q899 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Ddx58Q6Q899 Gm5913-201ENSMUST00000119397 1399 ntBASIC25.58■■□□□ 1.69
Ddx58Q6Q899 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Ddx58Q6Q899 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Ddx58Q6Q899 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC25.58■■□□□ 1.69
Ddx58Q6Q899 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Ddx58Q6Q899 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ddx58Q6Q899 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ddx58Q6Q899 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ddx58Q6Q899 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ddx58Q6Q899 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC25.56■■□□□ 1.68
Ddx58Q6Q899 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC25.56■■□□□ 1.68
Ddx58Q6Q899 Gm44949-201ENSMUST00000206423 1450 ntBASIC25.56■■□□□ 1.68
Ddx58Q6Q899 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ddx58Q6Q899 Serp2-204ENSMUST00000228055 705 ntBASIC25.56■■□□□ 1.68
Ddx58Q6Q899 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ddx58Q6Q899 AC166356.1-201ENSMUST00000228236 1426 ntBASIC25.55■■□□□ 1.68
Ddx58Q6Q899 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ddx58Q6Q899 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
Ddx58Q6Q899 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC25.55■■□□□ 1.68
Ddx58Q6Q899 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
Ddx58Q6Q899 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Ddx58Q6Q899 Gm26766-202ENSMUST00000227544 2347 ntBASIC25.55■■□□□ 1.68
Ddx58Q6Q899 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Ddx58Q6Q899 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ddx58Q6Q899 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ddx58Q6Q899 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ddx58Q6Q899 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ddx58Q6Q899 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Ddx58Q6Q899 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC25.54■■□□□ 1.68
Ddx58Q6Q899 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
Ddx58Q6Q899 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ddx58Q6Q899 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ddx58Q6Q899 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ddx58Q6Q899 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ddx58Q6Q899 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
Ddx58Q6Q899 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ddx58Q6Q899 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC25.52■■□□□ 1.68
Ddx58Q6Q899 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ddx58Q6Q899 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ddx58Q6Q899 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ddx58Q6Q899 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
Ddx58Q6Q899 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
Ddx58Q6Q899 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC25.51■■□□□ 1.67
Ddx58Q6Q899 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ddx58Q6Q899 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ddx58Q6Q899 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ddx58Q6Q899 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Ddx58Q6Q899 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC25.5■■□□□ 1.67
Ddx58Q6Q899 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC25.5■■□□□ 1.67
Ddx58Q6Q899 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Ddx58Q6Q899 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Ddx58Q6Q899 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Ddx58Q6Q899 Gm6139-201ENSMUST00000079261 882 ntBASIC25.5■■□□□ 1.67
Ddx58Q6Q899 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC25.5■■□□□ 1.67
Ddx58Q6Q899 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
Ddx58Q6Q899 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC25.49■■□□□ 1.67
Ddx58Q6Q899 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ddx58Q6Q899 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC25.49■■□□□ 1.67
Ddx58Q6Q899 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC25.49■■□□□ 1.67
Ddx58Q6Q899 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ddx58Q6Q899 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ddx58Q6Q899 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ddx58Q6Q899 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC25.48■■□□□ 1.67
Ddx58Q6Q899 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ddx58Q6Q899 Mir7075-201ENSMUST00000184187 82 ntBASIC25.48■■□□□ 1.67
Ddx58Q6Q899 Gm5576-201ENSMUST00000075809 1236 ntBASIC25.48■■□□□ 1.67
Ddx58Q6Q899 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ddx58Q6Q899 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ddx58Q6Q899 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ddx58Q6Q899 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ddx58Q6Q899 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ddx58Q6Q899 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Ddx58Q6Q899 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ddx58Q6Q899 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
Ddx58Q6Q899 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC25.46■■□□□ 1.67
Ddx58Q6Q899 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC25.46■■□□□ 1.67
Ddx58Q6Q899 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
Ddx58Q6Q899 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC25.46■■□□□ 1.67
Ddx58Q6Q899 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ddx58Q6Q899 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ddx58Q6Q899 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Ddx58Q6Q899 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Ddx58Q6Q899 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Ddx58Q6Q899 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ddx58Q6Q899 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Ddx58Q6Q899 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Ddx58Q6Q899 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
Ddx58Q6Q899 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC25.45■■□□□ 1.66
Ddx58Q6Q899 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC25.45■■□□□ 1.66
Ddx58Q6Q899 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC25.45■■□□□ 1.66
Ddx58Q6Q899 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ddx58Q6Q899 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Ddx58Q6Q899 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
Ddx58Q6Q899 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ddx58Q6Q899 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC25.44■■□□□ 1.66
Ddx58Q6Q899 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC25.44■■□□□ 1.66
Ddx58Q6Q899 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms