Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.83■□□□□ 0.93
Cachd1Q6PDJ1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Cachd1Q6PDJ1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cachd1Q6PDJ1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cachd1Q6PDJ1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cachd1Q6PDJ1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.82■□□□□ 0.92
Cachd1Q6PDJ1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cachd1Q6PDJ1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cachd1Q6PDJ1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cachd1Q6PDJ1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.82■□□□□ 0.92
Cachd1Q6PDJ1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cachd1Q6PDJ1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cachd1Q6PDJ1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Cachd1Q6PDJ1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cachd1Q6PDJ1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.81■□□□□ 0.92
Cachd1Q6PDJ1 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.81■□□□□ 0.92
Cachd1Q6PDJ1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cachd1Q6PDJ1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cachd1Q6PDJ1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cachd1Q6PDJ1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
Cachd1Q6PDJ1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Cachd1Q6PDJ1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cachd1Q6PDJ1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.8■□□□□ 0.92
Cachd1Q6PDJ1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.8■□□□□ 0.92
Cachd1Q6PDJ1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cachd1Q6PDJ1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cachd1Q6PDJ1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cachd1Q6PDJ1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cachd1Q6PDJ1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.79■□□□□ 0.92
Cachd1Q6PDJ1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cachd1Q6PDJ1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.79■□□□□ 0.92
Cachd1Q6PDJ1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.79■□□□□ 0.92
Cachd1Q6PDJ1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cachd1Q6PDJ1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Cachd1Q6PDJ1 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cachd1Q6PDJ1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cachd1Q6PDJ1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cachd1Q6PDJ1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cachd1Q6PDJ1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cachd1Q6PDJ1 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.78■□□□□ 0.92
Cachd1Q6PDJ1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.78■□□□□ 0.92
Cachd1Q6PDJ1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Cachd1Q6PDJ1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cachd1Q6PDJ1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cachd1Q6PDJ1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cachd1Q6PDJ1 Gm4968-201ENSMUST00000071458 858 ntBASIC20.77■□□□□ 0.92
Cachd1Q6PDJ1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cachd1Q6PDJ1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cachd1Q6PDJ1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cachd1Q6PDJ1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cachd1Q6PDJ1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cachd1Q6PDJ1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Cachd1Q6PDJ1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cachd1Q6PDJ1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.76■□□□□ 0.91
Cachd1Q6PDJ1 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Cachd1Q6PDJ1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Cachd1Q6PDJ1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cachd1Q6PDJ1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cachd1Q6PDJ1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cachd1Q6PDJ1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cachd1Q6PDJ1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cachd1Q6PDJ1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.75■□□□□ 0.91
Cachd1Q6PDJ1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cachd1Q6PDJ1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.75■□□□□ 0.91
Cachd1Q6PDJ1 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.75■□□□□ 0.91
Cachd1Q6PDJ1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cachd1Q6PDJ1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cachd1Q6PDJ1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.75■□□□□ 0.91
Cachd1Q6PDJ1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cachd1Q6PDJ1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cachd1Q6PDJ1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.74■□□□□ 0.91
Cachd1Q6PDJ1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Cachd1Q6PDJ1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cachd1Q6PDJ1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cachd1Q6PDJ1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cachd1Q6PDJ1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cachd1Q6PDJ1 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.73■□□□□ 0.91
Cachd1Q6PDJ1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cachd1Q6PDJ1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cachd1Q6PDJ1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Cachd1Q6PDJ1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.73■□□□□ 0.91
Cachd1Q6PDJ1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Cachd1Q6PDJ1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cachd1Q6PDJ1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cachd1Q6PDJ1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cachd1Q6PDJ1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cachd1Q6PDJ1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.72■□□□□ 0.91
Cachd1Q6PDJ1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.72■□□□□ 0.91
Cachd1Q6PDJ1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.72■□□□□ 0.91
Cachd1Q6PDJ1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cachd1Q6PDJ1 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.72■□□□□ 0.91
Cachd1Q6PDJ1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cachd1Q6PDJ1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cachd1Q6PDJ1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Cachd1Q6PDJ1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cachd1Q6PDJ1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Cachd1Q6PDJ1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cachd1Q6PDJ1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cachd1Q6PDJ1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cachd1Q6PDJ1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms