Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Smarcd3Q6P9Z1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Smarcd3Q6P9Z1 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.75■□□□□ 0.59
Smarcd3Q6P9Z1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.75■□□□□ 0.59
Smarcd3Q6P9Z1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Smarcd3Q6P9Z1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcd3Q6P9Z1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcd3Q6P9Z1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcd3Q6P9Z1 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.75■□□□□ 0.59
Smarcd3Q6P9Z1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcd3Q6P9Z1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Smarcd3Q6P9Z1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.74■□□□□ 0.59
Smarcd3Q6P9Z1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcd3Q6P9Z1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
Smarcd3Q6P9Z1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcd3Q6P9Z1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcd3Q6P9Z1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcd3Q6P9Z1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.74■□□□□ 0.59
Smarcd3Q6P9Z1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcd3Q6P9Z1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcd3Q6P9Z1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcd3Q6P9Z1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Smarcd3Q6P9Z1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcd3Q6P9Z1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Smarcd3Q6P9Z1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcd3Q6P9Z1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Smarcd3Q6P9Z1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcd3Q6P9Z1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.73■□□□□ 0.59
Smarcd3Q6P9Z1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcd3Q6P9Z1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcd3Q6P9Z1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcd3Q6P9Z1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcd3Q6P9Z1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcd3Q6P9Z1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcd3Q6P9Z1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcd3Q6P9Z1 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.73■□□□□ 0.59
Smarcd3Q6P9Z1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Smarcd3Q6P9Z1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.72■□□□□ 0.59
Smarcd3Q6P9Z1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd3Q6P9Z1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd3Q6P9Z1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd3Q6P9Z1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd3Q6P9Z1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.72■□□□□ 0.59
Smarcd3Q6P9Z1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd3Q6P9Z1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd3Q6P9Z1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd3Q6P9Z1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd3Q6P9Z1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd3Q6P9Z1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd3Q6P9Z1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd3Q6P9Z1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcd3Q6P9Z1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcd3Q6P9Z1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Smarcd3Q6P9Z1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcd3Q6P9Z1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcd3Q6P9Z1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcd3Q6P9Z1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.71■□□□□ 0.59
Smarcd3Q6P9Z1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcd3Q6P9Z1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcd3Q6P9Z1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcd3Q6P9Z1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcd3Q6P9Z1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcd3Q6P9Z1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcd3Q6P9Z1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcd3Q6P9Z1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.7■□□□□ 0.58
Smarcd3Q6P9Z1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Smarcd3Q6P9Z1 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.7■□□□□ 0.58
Smarcd3Q6P9Z1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcd3Q6P9Z1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcd3Q6P9Z1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.7■□□□□ 0.58
Smarcd3Q6P9Z1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcd3Q6P9Z1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd3Q6P9Z1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd3Q6P9Z1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Smarcd3Q6P9Z1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd3Q6P9Z1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd3Q6P9Z1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd3Q6P9Z1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd3Q6P9Z1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd3Q6P9Z1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd3Q6P9Z1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd3Q6P9Z1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.69■□□□□ 0.58
Smarcd3Q6P9Z1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd3Q6P9Z1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd3Q6P9Z1 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.69■□□□□ 0.58
Smarcd3Q6P9Z1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcd3Q6P9Z1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Smarcd3Q6P9Z1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcd3Q6P9Z1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcd3Q6P9Z1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Smarcd3Q6P9Z1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcd3Q6P9Z1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcd3Q6P9Z1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcd3Q6P9Z1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcd3Q6P9Z1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcd3Q6P9Z1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcd3Q6P9Z1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcd3Q6P9Z1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcd3Q6P9Z1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcd3Q6P9Z1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms