Protein–RNA interactions for Protein: Q64337

Sqstm1, Sequestosome-1, mousemouse

Known RBP Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1Q64337 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sqstm1Q64337 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Sqstm1Q64337 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sqstm1Q64337 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sqstm1Q64337 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sqstm1Q64337 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sqstm1Q64337 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sqstm1Q64337 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sqstm1Q64337 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sqstm1Q64337 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sqstm1Q64337 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sqstm1Q64337 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sqstm1Q64337 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Sqstm1Q64337 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sqstm1Q64337 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sqstm1Q64337 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.23■□□□□ 0.51
Sqstm1Q64337 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Sqstm1Q64337 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sqstm1Q64337 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sqstm1Q64337 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sqstm1Q64337 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sqstm1Q64337 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.22■□□□□ 0.51
Sqstm1Q64337 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sqstm1Q64337 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.22■□□□□ 0.51
Sqstm1Q64337 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sqstm1Q64337 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sqstm1Q64337 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sqstm1Q64337 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sqstm1Q64337 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sqstm1Q64337 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Sqstm1Q64337 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sqstm1Q64337 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sqstm1Q64337 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sqstm1Q64337 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sqstm1Q64337 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sqstm1Q64337 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sqstm1Q64337 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sqstm1Q64337 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sqstm1Q64337 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sqstm1Q64337 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sqstm1Q64337 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sqstm1Q64337 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sqstm1Q64337 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Sqstm1Q64337 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sqstm1Q64337 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sqstm1Q64337 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sqstm1Q64337 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sqstm1Q64337 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.2■□□□□ 0.5
Sqstm1Q64337 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Sqstm1Q64337 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.2■□□□□ 0.5
Sqstm1Q64337 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sqstm1Q64337 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sqstm1Q64337 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.19■□□□□ 0.5
Sqstm1Q64337 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sqstm1Q64337 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sqstm1Q64337 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Sqstm1Q64337 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sqstm1Q64337 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sqstm1Q64337 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sqstm1Q64337 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sqstm1Q64337 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sqstm1Q64337 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.19■□□□□ 0.5
Sqstm1Q64337 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.19■□□□□ 0.5
Sqstm1Q64337 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sqstm1Q64337 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Sqstm1Q64337 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Sqstm1Q64337 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Sqstm1Q64337 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sqstm1Q64337 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sqstm1Q64337 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sqstm1Q64337 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sqstm1Q64337 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sqstm1Q64337 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.18■□□□□ 0.5
Sqstm1Q64337 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sqstm1Q64337 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sqstm1Q64337 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sqstm1Q64337 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sqstm1Q64337 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Sqstm1Q64337 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sqstm1Q64337 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sqstm1Q64337 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sqstm1Q64337 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Sqstm1Q64337 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sqstm1Q64337 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Sqstm1Q64337 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sqstm1Q64337 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sqstm1Q64337 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Sqstm1Q64337 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.17■□□□□ 0.5
Sqstm1Q64337 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Sqstm1Q64337 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.17■□□□□ 0.5
Sqstm1Q64337 Gm7432-201ENSMUST00000210343 879 ntBASIC18.17■□□□□ 0.5
Sqstm1Q64337 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sqstm1Q64337 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.17■□□□□ 0.5
Sqstm1Q64337 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sqstm1Q64337 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Sqstm1Q64337 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sqstm1Q64337 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Sqstm1Q64337 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sqstm1Q64337 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sqstm1Q64337 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 160.3 ms