Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Six1Q62231 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Six1Q62231 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Six1Q62231 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.23■□□□□ 0.99
Six1Q62231 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Six1Q62231 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Six1Q62231 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Six1Q62231 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.23■□□□□ 0.99
Six1Q62231 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Six1Q62231 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Six1Q62231 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.23■□□□□ 0.99
Six1Q62231 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.23■□□□□ 0.99
Six1Q62231 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Six1Q62231 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Six1Q62231 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Six1Q62231 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Six1Q62231 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Six1Q62231 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Six1Q62231 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Six1Q62231 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Six1Q62231 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.22■□□□□ 0.99
Six1Q62231 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.22■□□□□ 0.99
Six1Q62231 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.22■□□□□ 0.99
Six1Q62231 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Six1Q62231 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Six1Q62231 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Six1Q62231 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Six1Q62231 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Six1Q62231 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.21■□□□□ 0.99
Six1Q62231 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Six1Q62231 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Six1Q62231 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Six1Q62231 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.2■□□□□ 0.98
Six1Q62231 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Six1Q62231 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Six1Q62231 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Six1Q62231 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Six1Q62231 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Six1Q62231 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Six1Q62231 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Six1Q62231 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Six1Q62231 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.2■□□□□ 0.98
Six1Q62231 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Six1Q62231 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.2■□□□□ 0.98
Six1Q62231 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Six1Q62231 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Six1Q62231 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Six1Q62231 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Six1Q62231 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Six1Q62231 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Six1Q62231 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Six1Q62231 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Six1Q62231 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Six1Q62231 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Six1Q62231 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.19■□□□□ 0.98
Six1Q62231 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Six1Q62231 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.18■□□□□ 0.98
Six1Q62231 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Six1Q62231 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.18■□□□□ 0.98
Six1Q62231 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Six1Q62231 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.18■□□□□ 0.98
Six1Q62231 Gm45444-201ENSMUST00000211394 898 ntBASIC21.18■□□□□ 0.98
Six1Q62231 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Six1Q62231 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Six1Q62231 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Six1Q62231 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Six1Q62231 Gm13238-201ENSMUST00000117655 780 ntBASIC21.17■□□□□ 0.98
Six1Q62231 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.17■□□□□ 0.98
Six1Q62231 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.17■□□□□ 0.98
Six1Q62231 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Six1Q62231 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Six1Q62231 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Six1Q62231 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Six1Q62231 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Six1Q62231 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.17■□□□□ 0.98
Six1Q62231 Cap2-205ENSMUST00000225824 1634 ntBASIC21.16■□□□□ 0.98
Six1Q62231 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Six1Q62231 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Six1Q62231 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.16■□□□□ 0.98
Six1Q62231 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Six1Q62231 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Six1Q62231 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Six1Q62231 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Six1Q62231 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Six1Q62231 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Six1Q62231 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.15■□□□□ 0.98
Six1Q62231 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Six1Q62231 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Six1Q62231 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Six1Q62231 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.15■□□□□ 0.98
Six1Q62231 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Six1Q62231 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Six1Q62231 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Six1Q62231 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Six1Q62231 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Six1Q62231 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.14■□□□□ 0.97
Six1Q62231 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Six1Q62231 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.14■□□□□ 0.97
Six1Q62231 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Six1Q62231 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms