Protein–RNA interactions for Protein: Q62177

Sema3b, Semaphorin-3B, mousemouse

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3bQ62177 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sema3bQ62177 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sema3bQ62177 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.52■□□□□ 0.72
Sema3bQ62177 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.52■□□□□ 0.72
Sema3bQ62177 Gm43137-201ENSMUST00000198052 594 ntBASIC19.52■□□□□ 0.72
Sema3bQ62177 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
Sema3bQ62177 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sema3bQ62177 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sema3bQ62177 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sema3bQ62177 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Sema3bQ62177 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Sema3bQ62177 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Sema3bQ62177 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sema3bQ62177 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Sema3bQ62177 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Sema3bQ62177 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.51■□□□□ 0.71
Sema3bQ62177 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sema3bQ62177 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Sema3bQ62177 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Sema3bQ62177 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.51■□□□□ 0.71
Sema3bQ62177 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sema3bQ62177 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sema3bQ62177 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sema3bQ62177 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sema3bQ62177 Mir7075-201ENSMUST00000184187 82 ntBASIC19.5■□□□□ 0.71
Sema3bQ62177 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sema3bQ62177 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sema3bQ62177 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.49■□□□□ 0.71
Sema3bQ62177 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.49■□□□□ 0.71
Sema3bQ62177 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sema3bQ62177 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sema3bQ62177 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sema3bQ62177 Gm43017-201ENSMUST00000198296 752 ntBASIC19.49■□□□□ 0.71
Sema3bQ62177 Gm9870-201ENSMUST00000063874 645 ntBASIC19.49■□□□□ 0.71
Sema3bQ62177 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Sema3bQ62177 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sema3bQ62177 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sema3bQ62177 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sema3bQ62177 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.48■□□□□ 0.71
Sema3bQ62177 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Sema3bQ62177 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sema3bQ62177 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sema3bQ62177 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sema3bQ62177 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sema3bQ62177 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sema3bQ62177 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sema3bQ62177 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sema3bQ62177 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
Sema3bQ62177 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sema3bQ62177 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sema3bQ62177 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sema3bQ62177 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sema3bQ62177 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sema3bQ62177 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sema3bQ62177 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.47■□□□□ 0.71
Sema3bQ62177 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Sema3bQ62177 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sema3bQ62177 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.47■□□□□ 0.71
Sema3bQ62177 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Sema3bQ62177 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sema3bQ62177 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sema3bQ62177 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sema3bQ62177 Gm5874-201ENSMUST00000096101 508 ntBASIC19.46■□□□□ 0.71
Sema3bQ62177 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Sema3bQ62177 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sema3bQ62177 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sema3bQ62177 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sema3bQ62177 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sema3bQ62177 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sema3bQ62177 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sema3bQ62177 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sema3bQ62177 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Sema3bQ62177 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.45■□□□□ 0.7
Sema3bQ62177 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Sema3bQ62177 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Sema3bQ62177 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.44■□□□□ 0.7
Sema3bQ62177 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Sema3bQ62177 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sema3bQ62177 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sema3bQ62177 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sema3bQ62177 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sema3bQ62177 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Sema3bQ62177 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sema3bQ62177 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sema3bQ62177 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sema3bQ62177 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sema3bQ62177 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.42■□□□□ 0.7
Sema3bQ62177 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sema3bQ62177 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.42■□□□□ 0.7
Sema3bQ62177 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sema3bQ62177 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Sema3bQ62177 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sema3bQ62177 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sema3bQ62177 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sema3bQ62177 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.41■□□□□ 0.7
Sema3bQ62177 Gm8493-201ENSMUST00000196881 489 ntBASIC19.41■□□□□ 0.7
Sema3bQ62177 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.41■□□□□ 0.7
Sema3bQ62177 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sema3bQ62177 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sema3bQ62177 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms