Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Gm26833-201ENSMUST00000180899 440 ntBASIC20.18■□□□□ 0.82
Rai1Q61818 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rai1Q61818 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rai1Q61818 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.18■□□□□ 0.82
Rai1Q61818 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rai1Q61818 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.17■□□□□ 0.82
Rai1Q61818 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Rai1Q61818 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rai1Q61818 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rai1Q61818 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rai1Q61818 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rai1Q61818 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.16■□□□□ 0.82
Rai1Q61818 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rai1Q61818 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Rai1Q61818 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rai1Q61818 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rai1Q61818 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.16■□□□□ 0.82
Rai1Q61818 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.16■□□□□ 0.82
Rai1Q61818 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rai1Q61818 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Rai1Q61818 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
Rai1Q61818 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Rai1Q61818 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rai1Q61818 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rai1Q61818 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rai1Q61818 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.15■□□□□ 0.82
Rai1Q61818 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rai1Q61818 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rai1Q61818 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.14■□□□□ 0.82
Rai1Q61818 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rai1Q61818 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rai1Q61818 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rai1Q61818 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Rai1Q61818 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rai1Q61818 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rai1Q61818 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rai1Q61818 Gm10493-201ENSMUST00000097270 612 ntBASIC20.13■□□□□ 0.81
Rai1Q61818 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rai1Q61818 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rai1Q61818 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rai1Q61818 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rai1Q61818 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.13■□□□□ 0.81
Rai1Q61818 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.13■□□□□ 0.81
Rai1Q61818 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rai1Q61818 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Rai1Q61818 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rai1Q61818 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rai1Q61818 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rai1Q61818 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rai1Q61818 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rai1Q61818 Gm10849-201ENSMUST00000100397 618 ntBASIC20.12■□□□□ 0.81
Rai1Q61818 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Rai1Q61818 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.12■□□□□ 0.81
Rai1Q61818 Gm40848-201ENSMUST00000221998 324 ntBASIC20.12■□□□□ 0.81
Rai1Q61818 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rai1Q61818 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rai1Q61818 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rai1Q61818 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.11■□□□□ 0.81
Rai1Q61818 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rai1Q61818 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rai1Q61818 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rai1Q61818 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rai1Q61818 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rai1Q61818 Gm7291-201ENSMUST00000199147 382 ntBASIC20.1■□□□□ 0.81
Rai1Q61818 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Rai1Q61818 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rai1Q61818 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rai1Q61818 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.1■□□□□ 0.81
Rai1Q61818 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rai1Q61818 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rai1Q61818 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rai1Q61818 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rai1Q61818 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Rai1Q61818 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.09■□□□□ 0.81
Rai1Q61818 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rai1Q61818 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.09■□□□□ 0.81
Rai1Q61818 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rai1Q61818 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rai1Q61818 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Rai1Q61818 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.09■□□□□ 0.81
Rai1Q61818 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.09■□□□□ 0.81
Rai1Q61818 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.09■□□□□ 0.81
Rai1Q61818 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.09■□□□□ 0.81
Rai1Q61818 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.09■□□□□ 0.81
Rai1Q61818 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rai1Q61818 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rai1Q61818 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rai1Q61818 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rai1Q61818 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.08■□□□□ 0.81
Rai1Q61818 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rai1Q61818 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rai1Q61818 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rai1Q61818 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Rai1Q61818 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rai1Q61818 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rai1Q61818 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Rai1Q61818 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.08■□□□□ 0.8
Rai1Q61818 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.08■□□□□ 0.8
Rai1Q61818 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.07■□□□□ 0.8
Rai1Q61818 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms