Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Scnn1aQ61180 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Scnn1aQ61180 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Scnn1aQ61180 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Scnn1aQ61180 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Scnn1aQ61180 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Scnn1aQ61180 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
Scnn1aQ61180 Gm44949-201ENSMUST00000206423 1450 ntBASIC23.84■■□□□ 1.41
Scnn1aQ61180 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC23.84■■□□□ 1.41
Scnn1aQ61180 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Scnn1aQ61180 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Scnn1aQ61180 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Scnn1aQ61180 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC23.83■■□□□ 1.41
Scnn1aQ61180 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC23.83■■□□□ 1.41
Scnn1aQ61180 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Scnn1aQ61180 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Scnn1aQ61180 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC23.82■■□□□ 1.4
Scnn1aQ61180 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Scnn1aQ61180 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
Scnn1aQ61180 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Scnn1aQ61180 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC23.81■■□□□ 1.4
Scnn1aQ61180 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC23.81■■□□□ 1.4
Scnn1aQ61180 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Scnn1aQ61180 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Scnn1aQ61180 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
Scnn1aQ61180 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Scnn1aQ61180 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Scnn1aQ61180 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Scnn1aQ61180 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
Scnn1aQ61180 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC23.81■■□□□ 1.4
Scnn1aQ61180 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Scnn1aQ61180 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
Scnn1aQ61180 Mir7075-201ENSMUST00000184187 82 ntBASIC23.81■■□□□ 1.4
Scnn1aQ61180 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC23.81■■□□□ 1.4
Scnn1aQ61180 Gm5576-201ENSMUST00000075809 1236 ntBASIC23.81■■□□□ 1.4
Scnn1aQ61180 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Scnn1aQ61180 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Scnn1aQ61180 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Scnn1aQ61180 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC23.81■■□□□ 1.4
Scnn1aQ61180 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Scnn1aQ61180 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Scnn1aQ61180 Gm26766-202ENSMUST00000227544 2347 ntBASIC23.8■■□□□ 1.4
Scnn1aQ61180 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Scnn1aQ61180 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Scnn1aQ61180 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Scnn1aQ61180 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scnn1aQ61180 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Scnn1aQ61180 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC23.79■■□□□ 1.4
Scnn1aQ61180 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scnn1aQ61180 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scnn1aQ61180 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC23.79■■□□□ 1.4
Scnn1aQ61180 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Scnn1aQ61180 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC23.79■■□□□ 1.4
Scnn1aQ61180 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scnn1aQ61180 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scnn1aQ61180 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Scnn1aQ61180 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Scnn1aQ61180 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scnn1aQ61180 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scnn1aQ61180 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Scnn1aQ61180 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Scnn1aQ61180 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Scnn1aQ61180 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Scnn1aQ61180 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
Scnn1aQ61180 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Scnn1aQ61180 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
Scnn1aQ61180 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Scnn1aQ61180 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
Scnn1aQ61180 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Scnn1aQ61180 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Scnn1aQ61180 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Scnn1aQ61180 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
Scnn1aQ61180 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Scnn1aQ61180 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Scnn1aQ61180 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Scnn1aQ61180 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Scnn1aQ61180 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Scnn1aQ61180 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Scnn1aQ61180 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Scnn1aQ61180 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC23.74■■□□□ 1.39
Scnn1aQ61180 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC23.74■■□□□ 1.39
Scnn1aQ61180 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Scnn1aQ61180 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Scnn1aQ61180 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Scnn1aQ61180 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC23.74■■□□□ 1.39
Scnn1aQ61180 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Scnn1aQ61180 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC23.74■■□□□ 1.39
Scnn1aQ61180 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Scnn1aQ61180 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Scnn1aQ61180 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC23.73■■□□□ 1.39
Scnn1aQ61180 Gm2011-201ENSMUST00000203124 1263 ntBASIC23.73■■□□□ 1.39
Scnn1aQ61180 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC23.73■■□□□ 1.39
Scnn1aQ61180 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
Scnn1aQ61180 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Scnn1aQ61180 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Scnn1aQ61180 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Scnn1aQ61180 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Scnn1aQ61180 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Scnn1aQ61180 Gm12251-201ENSMUST00000117893 792 ntBASIC23.72■■□□□ 1.39
Scnn1aQ61180 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms