Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav6-2Q5R1I4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav6-2Q5R1I4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav6-2Q5R1I4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Trav6-2Q5R1I4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav6-2Q5R1I4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
Trav6-2Q5R1I4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6-2Q5R1I4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6-2Q5R1I4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Trav6-2Q5R1I4 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6-2Q5R1I4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trav6-2Q5R1I4 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trav6-2Q5R1I4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trav6-2Q5R1I4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav6-2Q5R1I4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav6-2Q5R1I4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav6-2Q5R1I4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.12■□□□□ 0.49
Trav6-2Q5R1I4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav6-2Q5R1I4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.12■□□□□ 0.49
Trav6-2Q5R1I4 Gm43530-201ENSMUST00000195920 274 ntBASIC18.12■□□□□ 0.49
Trav6-2Q5R1I4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.12■□□□□ 0.49
Trav6-2Q5R1I4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.12■□□□□ 0.49
Trav6-2Q5R1I4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav6-2Q5R1I4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav6-2Q5R1I4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav6-2Q5R1I4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav6-2Q5R1I4 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav6-2Q5R1I4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trav6-2Q5R1I4 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav6-2Q5R1I4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav6-2Q5R1I4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.1■□□□□ 0.49
Trav6-2Q5R1I4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
Trav6-2Q5R1I4 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
Trav6-2Q5R1I4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav6-2Q5R1I4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Trav6-2Q5R1I4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav6-2Q5R1I4 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav6-2Q5R1I4 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav6-2Q5R1I4 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Trav6-2Q5R1I4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav6-2Q5R1I4 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.09■□□□□ 0.49
Trav6-2Q5R1I4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.09■□□□□ 0.49
Trav6-2Q5R1I4 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav6-2Q5R1I4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav6-2Q5R1I4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav6-2Q5R1I4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trav6-2Q5R1I4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.09■□□□□ 0.49
Trav6-2Q5R1I4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav6-2Q5R1I4 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav6-2Q5R1I4 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav6-2Q5R1I4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.08■□□□□ 0.49
Trav6-2Q5R1I4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav6-2Q5R1I4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trav6-2Q5R1I4 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trav6-2Q5R1I4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
Trav6-2Q5R1I4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trav6-2Q5R1I4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.08■□□□□ 0.48
Trav6-2Q5R1I4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav6-2Q5R1I4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trav6-2Q5R1I4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav6-2Q5R1I4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6-2Q5R1I4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6-2Q5R1I4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6-2Q5R1I4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6-2Q5R1I4 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6-2Q5R1I4 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.07■□□□□ 0.48
Trav6-2Q5R1I4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6-2Q5R1I4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trav6-2Q5R1I4 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6-2Q5R1I4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6-2Q5R1I4 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6-2Q5R1I4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6-2Q5R1I4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6-2Q5R1I4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6-2Q5R1I4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6-2Q5R1I4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6-2Q5R1I4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6-2Q5R1I4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6-2Q5R1I4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6-2Q5R1I4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6-2Q5R1I4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trav6-2Q5R1I4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.05■□□□□ 0.48
Trav6-2Q5R1I4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6-2Q5R1I4 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.05■□□□□ 0.48
Trav6-2Q5R1I4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trav6-2Q5R1I4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6-2Q5R1I4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6-2Q5R1I4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.05■□□□□ 0.48
Trav6-2Q5R1I4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6-2Q5R1I4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6-2Q5R1I4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6-2Q5R1I4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Trav6-2Q5R1I4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6-2Q5R1I4 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.04■□□□□ 0.48
Trav6-2Q5R1I4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.04■□□□□ 0.48
Trav6-2Q5R1I4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.04■□□□□ 0.48
Trav6-2Q5R1I4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
Trav6-2Q5R1I4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Trav6-2Q5R1I4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6-2Q5R1I4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms