Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Gm5131-201ENSMUST00000212776 1238 ntBASIC15.95■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC15.94■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Gm6311-201ENSMUST00000073790 878 ntBASIC15.93■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.92■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC15.92■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Golph3-202ENSMUST00000226517 2359 ntBASIC15.9■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Trav15-1-dv6-1Q5R1D2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC15.89■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.89■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.88■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms