Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav3-3Q5R1C3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trav3-3Q5R1C3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav3-3Q5R1C3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav3-3Q5R1C3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav3-3Q5R1C3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav3-3Q5R1C3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
Trav3-3Q5R1C3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav3-3Q5R1C3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav3-3Q5R1C3 Gm8503-201ENSMUST00000118131 455 ntBASIC15.29■□□□□ 0.04
Trav3-3Q5R1C3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC15.29■□□□□ 0.04
Trav3-3Q5R1C3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav3-3Q5R1C3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav3-3Q5R1C3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav3-3Q5R1C3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav3-3Q5R1C3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav3-3Q5R1C3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav3-3Q5R1C3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav3-3Q5R1C3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav3-3Q5R1C3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav3-3Q5R1C3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav3-3Q5R1C3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav3-3Q5R1C3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav3-3Q5R1C3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav3-3Q5R1C3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav3-3Q5R1C3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav3-3Q5R1C3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trav3-3Q5R1C3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav3-3Q5R1C3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav3-3Q5R1C3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav3-3Q5R1C3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav3-3Q5R1C3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav3-3Q5R1C3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav3-3Q5R1C3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
Trav3-3Q5R1C3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav3-3Q5R1C3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav3-3Q5R1C3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav3-3Q5R1C3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav3-3Q5R1C3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav3-3Q5R1C3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav3-3Q5R1C3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav3-3Q5R1C3 Gm13889-201ENSMUST00000099689 1386 ntBASIC15.26■□□□□ 0.03
Trav3-3Q5R1C3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav3-3Q5R1C3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav3-3Q5R1C3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav3-3Q5R1C3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav3-3Q5R1C3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav3-3Q5R1C3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Trav3-3Q5R1C3 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.25■□□□□ 0.03
Trav3-3Q5R1C3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC15.25■□□□□ 0.03
Trav3-3Q5R1C3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav3-3Q5R1C3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav3-3Q5R1C3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav3-3Q5R1C3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav3-3Q5R1C3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav3-3Q5R1C3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav3-3Q5R1C3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav3-3Q5R1C3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC15.24■□□□□ 0.03
Trav3-3Q5R1C3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav3-3Q5R1C3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav3-3Q5R1C3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav3-3Q5R1C3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav3-3Q5R1C3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav3-3Q5R1C3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav3-3Q5R1C3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
Trav3-3Q5R1C3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav3-3Q5R1C3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav3-3Q5R1C3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav3-3Q5R1C3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav3-3Q5R1C3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav3-3Q5R1C3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav3-3Q5R1C3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav3-3Q5R1C3 Gm4799-201ENSMUST00000095396 657 ntBASIC15.23■□□□□ 0.03
Trav3-3Q5R1C3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav3-3Q5R1C3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav3-3Q5R1C3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav3-3Q5R1C3 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav3-3Q5R1C3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav3-3Q5R1C3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav3-3Q5R1C3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav3-3Q5R1C3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav3-3Q5R1C3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav3-3Q5R1C3 AC153911.1-201ENSMUST00000220378 758 ntBASIC15.22■□□□□ 0.03
Trav3-3Q5R1C3 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav3-3Q5R1C3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav3-3Q5R1C3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav3-3Q5R1C3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav3-3Q5R1C3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav3-3Q5R1C3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav3-3Q5R1C3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav3-3Q5R1C3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav3-3Q5R1C3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav3-3Q5R1C3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav3-3Q5R1C3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav3-3Q5R1C3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav3-3Q5R1C3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav3-3Q5R1C3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC15.21■□□□□ 0.03
Trav3-3Q5R1C3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav3-3Q5R1C3 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.21■□□□□ 0.03
Trav3-3Q5R1C3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms