Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC23.94■■□□□ 1.42
Rc3h1Q4VGL6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rc3h1Q4VGL6 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC23.94■■□□□ 1.42
Rc3h1Q4VGL6 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rc3h1Q4VGL6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rc3h1Q4VGL6 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Rc3h1Q4VGL6 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Rc3h1Q4VGL6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Rc3h1Q4VGL6 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC23.93■■□□□ 1.42
Rc3h1Q4VGL6 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rc3h1Q4VGL6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rc3h1Q4VGL6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rc3h1Q4VGL6 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rc3h1Q4VGL6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rc3h1Q4VGL6 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Rc3h1Q4VGL6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC23.92■■□□□ 1.42
Rc3h1Q4VGL6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rc3h1Q4VGL6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rc3h1Q4VGL6 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rc3h1Q4VGL6 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC23.91■■□□□ 1.42
Rc3h1Q4VGL6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC23.91■■□□□ 1.42
Rc3h1Q4VGL6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rc3h1Q4VGL6 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC23.91■■□□□ 1.42
Rc3h1Q4VGL6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC23.91■■□□□ 1.42
Rc3h1Q4VGL6 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rc3h1Q4VGL6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC23.9■■□□□ 1.42
Rc3h1Q4VGL6 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Rc3h1Q4VGL6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC23.88■■□□□ 1.41
Rc3h1Q4VGL6 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rc3h1Q4VGL6 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC23.88■■□□□ 1.41
Rc3h1Q4VGL6 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rc3h1Q4VGL6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Rc3h1Q4VGL6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rc3h1Q4VGL6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rc3h1Q4VGL6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rc3h1Q4VGL6 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rc3h1Q4VGL6 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rc3h1Q4VGL6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Rc3h1Q4VGL6 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rc3h1Q4VGL6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Rc3h1Q4VGL6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rc3h1Q4VGL6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rc3h1Q4VGL6 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rc3h1Q4VGL6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Rc3h1Q4VGL6 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Rc3h1Q4VGL6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rc3h1Q4VGL6 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rc3h1Q4VGL6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Rc3h1Q4VGL6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC23.84■■□□□ 1.41
Rc3h1Q4VGL6 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Rc3h1Q4VGL6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rc3h1Q4VGL6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rc3h1Q4VGL6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rc3h1Q4VGL6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rc3h1Q4VGL6 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
Rc3h1Q4VGL6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
Rc3h1Q4VGL6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC23.83■■□□□ 1.41
Rc3h1Q4VGL6 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rc3h1Q4VGL6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rc3h1Q4VGL6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rc3h1Q4VGL6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Rc3h1Q4VGL6 Gm8770-201ENSMUST00000121113 1109 ntBASIC23.82■■□□□ 1.4
Rc3h1Q4VGL6 Gm43137-201ENSMUST00000198052 594 ntBASIC23.82■■□□□ 1.4
Rc3h1Q4VGL6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rc3h1Q4VGL6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rc3h1Q4VGL6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.81■■□□□ 1.4
Rc3h1Q4VGL6 Gm32051-202ENSMUST00000197905 2385 ntBASIC23.81■■□□□ 1.4
Rc3h1Q4VGL6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Rc3h1Q4VGL6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rc3h1Q4VGL6 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Rc3h1Q4VGL6 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Rc3h1Q4VGL6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Rc3h1Q4VGL6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rc3h1Q4VGL6 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rc3h1Q4VGL6 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC23.81■■□□□ 1.4
Rc3h1Q4VGL6 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Rc3h1Q4VGL6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
Rc3h1Q4VGL6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rc3h1Q4VGL6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rc3h1Q4VGL6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Rc3h1Q4VGL6 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rc3h1Q4VGL6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Rc3h1Q4VGL6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Rc3h1Q4VGL6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Rc3h1Q4VGL6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rc3h1Q4VGL6 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Rc3h1Q4VGL6 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Rc3h1Q4VGL6 Serp2-204ENSMUST00000228055 705 ntBASIC23.79■■□□□ 1.4
Rc3h1Q4VGL6 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC23.79■■□□□ 1.4
Rc3h1Q4VGL6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rc3h1Q4VGL6 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rc3h1Q4VGL6 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rc3h1Q4VGL6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC23.78■■□□□ 1.4
Rc3h1Q4VGL6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Rc3h1Q4VGL6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rc3h1Q4VGL6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC23.78■■□□□ 1.4
Rc3h1Q4VGL6 Gm44949-201ENSMUST00000206423 1450 ntBASIC23.78■■□□□ 1.4
Rc3h1Q4VGL6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rc3h1Q4VGL6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rc3h1Q4VGL6 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms