Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cdkl5Q3UTQ8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Cdkl5Q3UTQ8 Gm38160-201ENSMUST00000193090 2499 ntBASIC23.85■■□□□ 1.41
Cdkl5Q3UTQ8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Cdkl5Q3UTQ8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC23.85■■□□□ 1.41
Cdkl5Q3UTQ8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC23.85■■□□□ 1.41
Cdkl5Q3UTQ8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cdkl5Q3UTQ8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cdkl5Q3UTQ8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Cdkl5Q3UTQ8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Cdkl5Q3UTQ8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cdkl5Q3UTQ8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC23.84■■□□□ 1.41
Cdkl5Q3UTQ8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Cdkl5Q3UTQ8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cdkl5Q3UTQ8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Cdkl5Q3UTQ8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Cdkl5Q3UTQ8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC23.83■■□□□ 1.41
Cdkl5Q3UTQ8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Cdkl5Q3UTQ8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Cdkl5Q3UTQ8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cdkl5Q3UTQ8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cdkl5Q3UTQ8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Cdkl5Q3UTQ8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Cdkl5Q3UTQ8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Cdkl5Q3UTQ8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC23.83■■□□□ 1.4
Cdkl5Q3UTQ8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cdkl5Q3UTQ8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cdkl5Q3UTQ8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Cdkl5Q3UTQ8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cdkl5Q3UTQ8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cdkl5Q3UTQ8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cdkl5Q3UTQ8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC23.82■■□□□ 1.4
Cdkl5Q3UTQ8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cdkl5Q3UTQ8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Cdkl5Q3UTQ8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC23.81■■□□□ 1.4
Cdkl5Q3UTQ8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cdkl5Q3UTQ8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cdkl5Q3UTQ8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Cdkl5Q3UTQ8 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cdkl5Q3UTQ8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cdkl5Q3UTQ8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cdkl5Q3UTQ8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cdkl5Q3UTQ8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cdkl5Q3UTQ8 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cdkl5Q3UTQ8 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cdkl5Q3UTQ8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC23.79■■□□□ 1.4
Cdkl5Q3UTQ8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cdkl5Q3UTQ8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cdkl5Q3UTQ8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cdkl5Q3UTQ8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Cdkl5Q3UTQ8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cdkl5Q3UTQ8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cdkl5Q3UTQ8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC23.78■■□□□ 1.4
Cdkl5Q3UTQ8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cdkl5Q3UTQ8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC23.78■■□□□ 1.4
Cdkl5Q3UTQ8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Cdkl5Q3UTQ8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC23.77■■□□□ 1.4
Cdkl5Q3UTQ8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC23.77■■□□□ 1.4
Cdkl5Q3UTQ8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC23.77■■□□□ 1.4
Cdkl5Q3UTQ8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cdkl5Q3UTQ8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cdkl5Q3UTQ8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC23.77■■□□□ 1.4
Cdkl5Q3UTQ8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cdkl5Q3UTQ8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC23.76■■□□□ 1.39
Cdkl5Q3UTQ8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cdkl5Q3UTQ8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cdkl5Q3UTQ8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cdkl5Q3UTQ8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cdkl5Q3UTQ8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC23.76■■□□□ 1.39
Cdkl5Q3UTQ8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC23.76■■□□□ 1.39
Cdkl5Q3UTQ8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cdkl5Q3UTQ8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cdkl5Q3UTQ8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cdkl5Q3UTQ8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cdkl5Q3UTQ8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Cdkl5Q3UTQ8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC23.75■■□□□ 1.39
Cdkl5Q3UTQ8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cdkl5Q3UTQ8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Cdkl5Q3UTQ8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cdkl5Q3UTQ8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cdkl5Q3UTQ8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cdkl5Q3UTQ8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Cdkl5Q3UTQ8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cdkl5Q3UTQ8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC23.73■■□□□ 1.39
Cdkl5Q3UTQ8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Cdkl5Q3UTQ8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC23.73■■□□□ 1.39
Cdkl5Q3UTQ8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cdkl5Q3UTQ8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cdkl5Q3UTQ8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Cdkl5Q3UTQ8 Gm7417-201ENSMUST00000192950 473 ntBASIC23.72■■□□□ 1.39
Cdkl5Q3UTQ8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Cdkl5Q3UTQ8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Cdkl5Q3UTQ8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cdkl5Q3UTQ8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cdkl5Q3UTQ8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Cdkl5Q3UTQ8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cdkl5Q3UTQ8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cdkl5Q3UTQ8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cdkl5Q3UTQ8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Cdkl5Q3UTQ8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms