Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.73■□□□□ 0.43
Shisa3Q3UPR0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.73■□□□□ 0.43
Shisa3Q3UPR0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Shisa3Q3UPR0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shisa3Q3UPR0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Shisa3Q3UPR0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shisa3Q3UPR0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shisa3Q3UPR0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shisa3Q3UPR0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shisa3Q3UPR0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.72■□□□□ 0.43
Shisa3Q3UPR0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shisa3Q3UPR0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Shisa3Q3UPR0 Gm10420-201ENSMUST00000121713 882 ntBASIC17.72■□□□□ 0.43
Shisa3Q3UPR0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.72■□□□□ 0.43
Shisa3Q3UPR0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shisa3Q3UPR0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shisa3Q3UPR0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shisa3Q3UPR0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shisa3Q3UPR0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Shisa3Q3UPR0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shisa3Q3UPR0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shisa3Q3UPR0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shisa3Q3UPR0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shisa3Q3UPR0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shisa3Q3UPR0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shisa3Q3UPR0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shisa3Q3UPR0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Shisa3Q3UPR0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shisa3Q3UPR0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shisa3Q3UPR0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shisa3Q3UPR0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shisa3Q3UPR0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shisa3Q3UPR0 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.7■□□□□ 0.42
Shisa3Q3UPR0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.7■□□□□ 0.42
Shisa3Q3UPR0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Shisa3Q3UPR0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shisa3Q3UPR0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shisa3Q3UPR0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shisa3Q3UPR0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Shisa3Q3UPR0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Shisa3Q3UPR0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa3Q3UPR0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa3Q3UPR0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa3Q3UPR0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.69■□□□□ 0.42
Shisa3Q3UPR0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa3Q3UPR0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa3Q3UPR0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa3Q3UPR0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa3Q3UPR0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa3Q3UPR0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa3Q3UPR0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa3Q3UPR0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa3Q3UPR0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa3Q3UPR0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa3Q3UPR0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa3Q3UPR0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa3Q3UPR0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa3Q3UPR0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.68■□□□□ 0.42
Shisa3Q3UPR0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa3Q3UPR0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa3Q3UPR0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shisa3Q3UPR0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Shisa3Q3UPR0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shisa3Q3UPR0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Shisa3Q3UPR0 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.67■□□□□ 0.42
Shisa3Q3UPR0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Shisa3Q3UPR0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shisa3Q3UPR0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shisa3Q3UPR0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shisa3Q3UPR0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shisa3Q3UPR0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shisa3Q3UPR0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shisa3Q3UPR0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa3Q3UPR0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa3Q3UPR0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa3Q3UPR0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa3Q3UPR0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa3Q3UPR0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Shisa3Q3UPR0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa3Q3UPR0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Shisa3Q3UPR0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.66■□□□□ 0.42
Shisa3Q3UPR0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa3Q3UPR0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa3Q3UPR0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa3Q3UPR0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.66■□□□□ 0.42
Shisa3Q3UPR0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.66■□□□□ 0.42
Shisa3Q3UPR0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Shisa3Q3UPR0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shisa3Q3UPR0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.65■□□□□ 0.42
Shisa3Q3UPR0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shisa3Q3UPR0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Shisa3Q3UPR0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Shisa3Q3UPR0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shisa3Q3UPR0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Shisa3Q3UPR0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Shisa3Q3UPR0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Shisa3Q3UPR0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Shisa3Q3UPR0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Shisa3Q3UPR0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
Shisa3Q3UPR0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms