Protein–RNA interactions for Protein: Q3ULP7

Ctsll3, Cathepsin L-like 3, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctsll3Q3ULP7 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ctsll3Q3ULP7 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ctsll3Q3ULP7 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ctsll3Q3ULP7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ctsll3Q3ULP7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ctsll3Q3ULP7 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Ctsll3Q3ULP7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ctsll3Q3ULP7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ctsll3Q3ULP7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ctsll3Q3ULP7 Gm7291-201ENSMUST00000199147 382 ntBASIC18.95■□□□□ 0.62
Ctsll3Q3ULP7 Gm43060-201ENSMUST00000200621 289 ntBASIC18.95■□□□□ 0.62
Ctsll3Q3ULP7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.95■□□□□ 0.62
Ctsll3Q3ULP7 Spcs1-204ENSMUST00000226782 949 ntBASIC18.95■□□□□ 0.62
Ctsll3Q3ULP7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ctsll3Q3ULP7 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ctsll3Q3ULP7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ctsll3Q3ULP7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ctsll3Q3ULP7 Gm43530-201ENSMUST00000195920 274 ntBASIC18.94■□□□□ 0.62
Ctsll3Q3ULP7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ctsll3Q3ULP7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.94■□□□□ 0.62
Ctsll3Q3ULP7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.94■□□□□ 0.62
Ctsll3Q3ULP7 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ctsll3Q3ULP7 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ctsll3Q3ULP7 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ctsll3Q3ULP7 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.93■□□□□ 0.62
Ctsll3Q3ULP7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Ctsll3Q3ULP7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Ctsll3Q3ULP7 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ctsll3Q3ULP7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ctsll3Q3ULP7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ctsll3Q3ULP7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ctsll3Q3ULP7 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ctsll3Q3ULP7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.93■□□□□ 0.62
Ctsll3Q3ULP7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ctsll3Q3ULP7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ctsll3Q3ULP7 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ctsll3Q3ULP7 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ctsll3Q3ULP7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ctsll3Q3ULP7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.92■□□□□ 0.62
Ctsll3Q3ULP7 Gm42569-201ENSMUST00000200539 472 ntBASIC18.92■□□□□ 0.62
Ctsll3Q3ULP7 Gm40848-201ENSMUST00000221998 324 ntBASIC18.92■□□□□ 0.62
Ctsll3Q3ULP7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ctsll3Q3ULP7 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ctsll3Q3ULP7 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ctsll3Q3ULP7 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ctsll3Q3ULP7 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ctsll3Q3ULP7 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ctsll3Q3ULP7 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ctsll3Q3ULP7 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ctsll3Q3ULP7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctsll3Q3ULP7 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ctsll3Q3ULP7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.91■□□□□ 0.62
Ctsll3Q3ULP7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Ctsll3Q3ULP7 Gm26571-201ENSMUST00000181399 666 ntBASIC18.91■□□□□ 0.62
Ctsll3Q3ULP7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
Ctsll3Q3ULP7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ctsll3Q3ULP7 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ctsll3Q3ULP7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ctsll3Q3ULP7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ctsll3Q3ULP7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.9■□□□□ 0.62
Ctsll3Q3ULP7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ctsll3Q3ULP7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ctsll3Q3ULP7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
Ctsll3Q3ULP7 Gm10493-201ENSMUST00000097270 612 ntBASIC18.9■□□□□ 0.62
Ctsll3Q3ULP7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
Ctsll3Q3ULP7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ctsll3Q3ULP7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ctsll3Q3ULP7 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ctsll3Q3ULP7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ctsll3Q3ULP7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ctsll3Q3ULP7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.89■□□□□ 0.61
Ctsll3Q3ULP7 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ctsll3Q3ULP7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.88■□□□□ 0.61
Ctsll3Q3ULP7 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ctsll3Q3ULP7 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ctsll3Q3ULP7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.88■□□□□ 0.61
Ctsll3Q3ULP7 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ctsll3Q3ULP7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.88■□□□□ 0.61
Ctsll3Q3ULP7 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ctsll3Q3ULP7 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ctsll3Q3ULP7 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.88■□□□□ 0.61
Ctsll3Q3ULP7 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Ctsll3Q3ULP7 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ctsll3Q3ULP7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ctsll3Q3ULP7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ctsll3Q3ULP7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Ctsll3Q3ULP7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.87■□□□□ 0.61
Ctsll3Q3ULP7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.87■□□□□ 0.61
Ctsll3Q3ULP7 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.87■□□□□ 0.61
Ctsll3Q3ULP7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ctsll3Q3ULP7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ctsll3Q3ULP7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ctsll3Q3ULP7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Ctsll3Q3ULP7 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ctsll3Q3ULP7 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Ctsll3Q3ULP7 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.86■□□□□ 0.61
Ctsll3Q3ULP7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ctsll3Q3ULP7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.86■□□□□ 0.61
Ctsll3Q3ULP7 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.86■□□□□ 0.61
Ctsll3Q3ULP7 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms