Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.86■□□□□ 0.45
Q3U1D9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Q3U1D9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Q3U1D9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Q3U1D9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.86■□□□□ 0.45
Q3U1D9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Q3U1D9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Q3U1D9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Q3U1D9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Q3U1D9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Q3U1D9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Q3U1D9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Q3U1D9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Q3U1D9 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.85■□□□□ 0.45
Q3U1D9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.85■□□□□ 0.45
Q3U1D9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Q3U1D9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Q3U1D9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Q3U1D9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Q3U1D9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Q3U1D9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Q3U1D9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q3U1D9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Q3U1D9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.84■□□□□ 0.45
Q3U1D9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q3U1D9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Q3U1D9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q3U1D9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.84■□□□□ 0.45
Q3U1D9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.84■□□□□ 0.45
Q3U1D9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q3U1D9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Q3U1D9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q3U1D9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Q3U1D9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q3U1D9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Q3U1D9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Q3U1D9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Q3U1D9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Q3U1D9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Q3U1D9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Q3U1D9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Q3U1D9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Q3U1D9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Q3U1D9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Q3U1D9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Q3U1D9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Q3U1D9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Q3U1D9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Q3U1D9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Q3U1D9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Q3U1D9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Q3U1D9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Q3U1D9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
Q3U1D9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Q3U1D9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Q3U1D9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Q3U1D9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.82■□□□□ 0.44
Q3U1D9 Gm43137-201ENSMUST00000198052 594 ntBASIC17.81■□□□□ 0.44
Q3U1D9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Q3U1D9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Q3U1D9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Q3U1D9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Q3U1D9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Q3U1D9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Q3U1D9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.8■□□□□ 0.44
Q3U1D9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.8■□□□□ 0.44
Q3U1D9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Q3U1D9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Q3U1D9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Q3U1D9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.79■□□□□ 0.44
Q3U1D9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Q3U1D9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Q3U1D9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.79■□□□□ 0.44
Q3U1D9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Q3U1D9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.79■□□□□ 0.44
Q3U1D9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Q3U1D9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Q3U1D9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Q3U1D9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Q3U1D9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Q3U1D9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Q3U1D9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Q3U1D9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Q3U1D9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Q3U1D9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.78■□□□□ 0.44
Q3U1D9 Gm43530-201ENSMUST00000195920 274 ntBASIC17.78■□□□□ 0.44
Q3U1D9 Serp2-204ENSMUST00000228055 705 ntBASIC17.78■□□□□ 0.44
Q3U1D9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.78■□□□□ 0.44
Q3U1D9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Q3U1D9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Q3U1D9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Q3U1D9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Q3U1D9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Q3U1D9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.77■□□□□ 0.44
Q3U1D9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Q3U1D9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.77■□□□□ 0.44
Q3U1D9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Q3U1D9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Q3U1D9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Q3U1D9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms