Protein–RNA interactions for Protein: Q3TZA2

Cdkl4, Cyclin-dependent kinase-like 4, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl4Q3TZA2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdkl4Q3TZA2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdkl4Q3TZA2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Cdkl4Q3TZA2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.62■□□□□ 0.89
Cdkl4Q3TZA2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdkl4Q3TZA2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdkl4Q3TZA2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdkl4Q3TZA2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.62■□□□□ 0.89
Cdkl4Q3TZA2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Cdkl4Q3TZA2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdkl4Q3TZA2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkl4Q3TZA2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkl4Q3TZA2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkl4Q3TZA2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
Cdkl4Q3TZA2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.61■□□□□ 0.89
Cdkl4Q3TZA2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkl4Q3TZA2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.61■□□□□ 0.89
Cdkl4Q3TZA2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkl4Q3TZA2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdkl4Q3TZA2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdkl4Q3TZA2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdkl4Q3TZA2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Cdkl4Q3TZA2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdkl4Q3TZA2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdkl4Q3TZA2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdkl4Q3TZA2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdkl4Q3TZA2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdkl4Q3TZA2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdkl4Q3TZA2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdkl4Q3TZA2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdkl4Q3TZA2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdkl4Q3TZA2 Gm12922-201ENSMUST00000120626 809 ntBASIC20.58■□□□□ 0.89
Cdkl4Q3TZA2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdkl4Q3TZA2 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.58■□□□□ 0.88
Cdkl4Q3TZA2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Cdkl4Q3TZA2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Cdkl4Q3TZA2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.57■□□□□ 0.88
Cdkl4Q3TZA2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdkl4Q3TZA2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Cdkl4Q3TZA2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdkl4Q3TZA2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cdkl4Q3TZA2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkl4Q3TZA2 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.56■□□□□ 0.88
Cdkl4Q3TZA2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkl4Q3TZA2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.56■□□□□ 0.88
Cdkl4Q3TZA2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkl4Q3TZA2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkl4Q3TZA2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkl4Q3TZA2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkl4Q3TZA2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkl4Q3TZA2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cdkl4Q3TZA2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Cdkl4Q3TZA2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdkl4Q3TZA2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.55■□□□□ 0.88
Cdkl4Q3TZA2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.55■□□□□ 0.88
Cdkl4Q3TZA2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdkl4Q3TZA2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.55■□□□□ 0.88
Cdkl4Q3TZA2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.55■□□□□ 0.88
Cdkl4Q3TZA2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.55■□□□□ 0.88
Cdkl4Q3TZA2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Cdkl4Q3TZA2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdkl4Q3TZA2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cdkl4Q3TZA2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Cdkl4Q3TZA2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Cdkl4Q3TZA2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdkl4Q3TZA2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdkl4Q3TZA2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.54■□□□□ 0.88
Cdkl4Q3TZA2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.54■□□□□ 0.88
Cdkl4Q3TZA2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdkl4Q3TZA2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdkl4Q3TZA2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdkl4Q3TZA2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.53■□□□□ 0.88
Cdkl4Q3TZA2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.53■□□□□ 0.88
Cdkl4Q3TZA2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.53■□□□□ 0.88
Cdkl4Q3TZA2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Cdkl4Q3TZA2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.53■□□□□ 0.88
Cdkl4Q3TZA2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cdkl4Q3TZA2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.53■□□□□ 0.88
Cdkl4Q3TZA2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdkl4Q3TZA2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdkl4Q3TZA2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Cdkl4Q3TZA2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdkl4Q3TZA2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdkl4Q3TZA2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
Cdkl4Q3TZA2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Cdkl4Q3TZA2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cdkl4Q3TZA2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdkl4Q3TZA2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Cdkl4Q3TZA2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.51■□□□□ 0.87
Cdkl4Q3TZA2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdkl4Q3TZA2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdkl4Q3TZA2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdkl4Q3TZA2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdkl4Q3TZA2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdkl4Q3TZA2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.5■□□□□ 0.87
Cdkl4Q3TZA2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdkl4Q3TZA2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.5■□□□□ 0.87
Cdkl4Q3TZA2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdkl4Q3TZA2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdkl4Q3TZA2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms