Protein–RNA interactions for Protein: Q01705

Notch1, Neurogenic locus notch homolog protein 1, mousemouse

Predictions only

Length 2,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1Q01705 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
Notch1Q01705 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15□□□□□ -0.01
Notch1Q01705 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Notch1Q01705 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.99□□□□□ -0.01
Notch1Q01705 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Notch1Q01705 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Notch1Q01705 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Notch1Q01705 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Notch1Q01705 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Notch1Q01705 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Notch1Q01705 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.99□□□□□ -0.01
Notch1Q01705 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Notch1Q01705 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Notch1Q01705 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Notch1Q01705 Gm4430-201ENSMUST00000192413 1943 ntBASIC14.98□□□□□ -0.01
Notch1Q01705 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Notch1Q01705 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Notch1Q01705 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Notch1Q01705 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Notch1Q01705 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Notch1Q01705 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.98□□□□□ -0.01
Notch1Q01705 Smad6-203ENSMUST00000179458 273 ntBASIC14.98□□□□□ -0.01
Notch1Q01705 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Notch1Q01705 Kdm3b-204ENSMUST00000224715 2032 ntBASIC14.97□□□□□ -0.01
Notch1Q01705 AC115037.1-201ENSMUST00000223391 2173 ntBASIC14.97□□□□□ -0.01
Notch1Q01705 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Notch1Q01705 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.97□□□□□ -0.01
Notch1Q01705 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Notch1Q01705 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC14.97□□□□□ -0.01
Notch1Q01705 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Notch1Q01705 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Notch1Q01705 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Notch1Q01705 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Notch1Q01705 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Notch1Q01705 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Notch1Q01705 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Notch1Q01705 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.97□□□□□ -0.01
Notch1Q01705 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Notch1Q01705 Gm10602-201ENSMUST00000098239 609 ntBASIC14.97□□□□□ -0.01
Notch1Q01705 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Notch1Q01705 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Notch1Q01705 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Notch1Q01705 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Notch1Q01705 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC14.96□□□□□ -0.01
Notch1Q01705 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Notch1Q01705 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Notch1Q01705 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.96□□□□□ -0.02
Notch1Q01705 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.96□□□□□ -0.02
Notch1Q01705 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Notch1Q01705 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC14.96□□□□□ -0.02
Notch1Q01705 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Notch1Q01705 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Notch1Q01705 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Notch1Q01705 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.95□□□□□ -0.02
Notch1Q01705 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.95□□□□□ -0.02
Notch1Q01705 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Notch1Q01705 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Notch1Q01705 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Notch1Q01705 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Notch1Q01705 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Notch1Q01705 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Notch1Q01705 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Notch1Q01705 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.94□□□□□ -0.02
Notch1Q01705 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Notch1Q01705 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Notch1Q01705 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Notch1Q01705 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC14.93□□□□□ -0.02
Notch1Q01705 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Notch1Q01705 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Notch1Q01705 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Notch1Q01705 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Notch1Q01705 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Notch1Q01705 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Notch1Q01705 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Notch1Q01705 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Notch1Q01705 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Notch1Q01705 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Notch1Q01705 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Notch1Q01705 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Notch1Q01705 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Notch1Q01705 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Notch1Q01705 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Notch1Q01705 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Notch1Q01705 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Notch1Q01705 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Notch1Q01705 Gm42699-201ENSMUST00000198104 1657 ntBASIC14.92□□□□□ -0.02
Notch1Q01705 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.92□□□□□ -0.02
Notch1Q01705 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Notch1Q01705 Nespas-201ENSMUST00000143738 1083 ntBASIC14.91□□□□□ -0.02
Notch1Q01705 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.91□□□□□ -0.02
Notch1Q01705 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.91□□□□□ -0.02
Notch1Q01705 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Notch1Q01705 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC14.91□□□□□ -0.02
Notch1Q01705 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Notch1Q01705 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Notch1Q01705 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Notch1Q01705 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Notch1Q01705 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Notch1Q01705 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Notch1Q01705 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms