Protein–RNA interactions for Protein: P84444

Ccl21a, C-C motif chemokine 21a, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl21aP84444 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl21aP84444 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.37■□□□□ 0.37
Ccl21aP84444 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl21aP84444 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl21aP84444 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl21aP84444 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl21aP84444 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl21aP84444 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.37■□□□□ 0.37
Ccl21aP84444 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl21aP84444 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl21aP84444 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl21aP84444 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl21aP84444 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.36■□□□□ 0.37
Ccl21aP84444 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccl21aP84444 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ccl21aP84444 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccl21aP84444 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.36■□□□□ 0.37
Ccl21aP84444 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.36■□□□□ 0.37
Ccl21aP84444 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccl21aP84444 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccl21aP84444 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccl21aP84444 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccl21aP84444 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ccl21aP84444 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.35■□□□□ 0.37
Ccl21aP84444 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ccl21aP84444 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.35■□□□□ 0.37
Ccl21aP84444 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.35■□□□□ 0.37
Ccl21aP84444 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccl21aP84444 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccl21aP84444 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccl21aP84444 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccl21aP84444 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.34■□□□□ 0.37
Ccl21aP84444 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ccl21aP84444 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccl21aP84444 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccl21aP84444 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccl21aP84444 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccl21aP84444 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccl21aP84444 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccl21aP84444 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccl21aP84444 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccl21aP84444 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Ccl21aP84444 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccl21aP84444 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccl21aP84444 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccl21aP84444 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.32■□□□□ 0.36
Ccl21aP84444 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
Ccl21aP84444 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.32■□□□□ 0.36
Ccl21aP84444 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.32■□□□□ 0.36
Ccl21aP84444 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Ccl21aP84444 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccl21aP84444 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccl21aP84444 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccl21aP84444 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccl21aP84444 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
Ccl21aP84444 Gm12933-201ENSMUST00000120203 872 ntBASIC17.31■□□□□ 0.36
Ccl21aP84444 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.31■□□□□ 0.36
Ccl21aP84444 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccl21aP84444 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccl21aP84444 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccl21aP84444 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ccl21aP84444 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccl21aP84444 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.3■□□□□ 0.36
Ccl21aP84444 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.3■□□□□ 0.36
Ccl21aP84444 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.3■□□□□ 0.36
Ccl21aP84444 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.3■□□□□ 0.36
Ccl21aP84444 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ccl21aP84444 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.3■□□□□ 0.36
Ccl21aP84444 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccl21aP84444 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
Ccl21aP84444 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccl21aP84444 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.29■□□□□ 0.36
Ccl21aP84444 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccl21aP84444 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccl21aP84444 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ccl21aP84444 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.29■□□□□ 0.36
Ccl21aP84444 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccl21aP84444 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.29■□□□□ 0.36
Ccl21aP84444 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.29■□□□□ 0.36
Ccl21aP84444 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Ccl21aP84444 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Ccl21aP84444 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccl21aP84444 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ccl21aP84444 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccl21aP84444 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccl21aP84444 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccl21aP84444 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccl21aP84444 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccl21aP84444 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccl21aP84444 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ccl21aP84444 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccl21aP84444 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccl21aP84444 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccl21aP84444 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccl21aP84444 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccl21aP84444 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccl21aP84444 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccl21aP84444 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccl21aP84444 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccl21aP84444 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms