Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gm5913-201ENSMUST00000119397 1399 ntBASIC14.62□□□□□ -0.07
Rpl39P62892 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rpl39P62892 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC14.62□□□□□ -0.07
Rpl39P62892 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rpl39P62892 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rpl39P62892 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
Rpl39P62892 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rpl39P62892 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Rpl39P62892 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rpl39P62892 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.62□□□□□ -0.07
Rpl39P62892 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Rpl39P62892 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Rpl39P62892 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Rpl39P62892 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rpl39P62892 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rpl39P62892 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC14.61□□□□□ -0.07
Rpl39P62892 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rpl39P62892 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rpl39P62892 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Rpl39P62892 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rpl39P62892 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rpl39P62892 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rpl39P62892 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Rpl39P62892 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rpl39P62892 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Rpl39P62892 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rpl39P62892 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC14.61□□□□□ -0.07
Rpl39P62892 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpl39P62892 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Rpl39P62892 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpl39P62892 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Rpl39P62892 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpl39P62892 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rpl39P62892 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rpl39P62892 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpl39P62892 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpl39P62892 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpl39P62892 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rpl39P62892 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpl39P62892 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Rpl39P62892 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Rpl39P62892 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rpl39P62892 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rpl39P62892 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpl39P62892 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Rpl39P62892 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rpl39P62892 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpl39P62892 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpl39P62892 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpl39P62892 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpl39P62892 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpl39P62892 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpl39P62892 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rpl39P62892 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpl39P62892 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC14.59□□□□□ -0.07
Rpl39P62892 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rpl39P62892 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rpl39P62892 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rpl39P62892 AC158990.1-201ENSMUST00000221450 2016 ntBASIC14.58□□□□□ -0.08
Rpl39P62892 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Rpl39P62892 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpl39P62892 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpl39P62892 Gm6311-201ENSMUST00000073790 878 ntBASIC14.58□□□□□ -0.08
Rpl39P62892 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpl39P62892 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpl39P62892 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rpl39P62892 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpl39P62892 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpl39P62892 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC14.57□□□□□ -0.08
Rpl39P62892 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpl39P62892 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Rpl39P62892 AC152827.1-201ENSMUST00000221143 2189 ntBASIC14.57□□□□□ -0.08
Rpl39P62892 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Rpl39P62892 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpl39P62892 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpl39P62892 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpl39P62892 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpl39P62892 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rpl39P62892 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpl39P62892 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rpl39P62892 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rpl39P62892 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpl39P62892 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Rpl39P62892 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpl39P62892 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC14.56□□□□□ -0.08
Rpl39P62892 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Rpl39P62892 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpl39P62892 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpl39P62892 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC14.56□□□□□ -0.08
Rpl39P62892 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC14.56□□□□□ -0.08
Rpl39P62892 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC14.56□□□□□ -0.08
Rpl39P62892 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpl39P62892 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpl39P62892 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpl39P62892 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Rpl39P62892 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpl39P62892 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rpl39P62892 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rpl39P62892 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rpl39P62892 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms