Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nup43P59235 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Nup43P59235 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nup43P59235 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup43P59235 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
Nup43P59235 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup43P59235 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup43P59235 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup43P59235 Gm22238-201ENSMUST00000175222 88 ntBASIC19.44■□□□□ 0.7
Nup43P59235 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Nup43P59235 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.44■□□□□ 0.7
Nup43P59235 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup43P59235 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup43P59235 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup43P59235 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Nup43P59235 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nup43P59235 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup43P59235 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Nup43P59235 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup43P59235 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup43P59235 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Nup43P59235 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
Nup43P59235 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.42■□□□□ 0.7
Nup43P59235 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.42■□□□□ 0.7
Nup43P59235 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.42■□□□□ 0.7
Nup43P59235 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Nup43P59235 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup43P59235 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Nup43P59235 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup43P59235 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup43P59235 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
Nup43P59235 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup43P59235 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Nup43P59235 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nup43P59235 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.41■□□□□ 0.7
Nup43P59235 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Nup43P59235 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.41■□□□□ 0.7
Nup43P59235 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Nup43P59235 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup43P59235 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Nup43P59235 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nup43P59235 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nup43P59235 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nup43P59235 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nup43P59235 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nup43P59235 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nup43P59235 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nup43P59235 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Nup43P59235 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nup43P59235 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Nup43P59235 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nup43P59235 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.39■□□□□ 0.69
Nup43P59235 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Nup43P59235 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nup43P59235 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nup43P59235 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nup43P59235 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nup43P59235 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.38■□□□□ 0.69
Nup43P59235 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.38■□□□□ 0.69
Nup43P59235 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nup43P59235 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.38■□□□□ 0.69
Nup43P59235 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nup43P59235 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nup43P59235 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.37■□□□□ 0.69
Nup43P59235 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Nup43P59235 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nup43P59235 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nup43P59235 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nup43P59235 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
Nup43P59235 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nup43P59235 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nup43P59235 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Nup43P59235 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.36■□□□□ 0.69
Nup43P59235 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nup43P59235 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nup43P59235 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup43P59235 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.35■□□□□ 0.69
Nup43P59235 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup43P59235 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup43P59235 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup43P59235 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nup43P59235 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.35■□□□□ 0.69
Nup43P59235 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Nup43P59235 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nup43P59235 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.35■□□□□ 0.69
Nup43P59235 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup43P59235 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nup43P59235 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup43P59235 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup43P59235 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup43P59235 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.34■□□□□ 0.69
Nup43P59235 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.34■□□□□ 0.69
Nup43P59235 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nup43P59235 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.34■□□□□ 0.69
Nup43P59235 Gm7143-201ENSMUST00000222811 859 ntBASIC19.34■□□□□ 0.69
Nup43P59235 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Nup43P59235 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nup43P59235 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.33■□□□□ 0.68
Nup43P59235 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.33■□□□□ 0.68
Nup43P59235 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms