Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sox3P53784 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sox3P53784 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.56■□□□□ 0.72
Sox3P53784 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sox3P53784 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sox3P53784 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sox3P53784 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sox3P53784 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox3P53784 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Sox3P53784 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox3P53784 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.55■□□□□ 0.72
Sox3P53784 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox3P53784 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox3P53784 Gm6139-201ENSMUST00000079261 882 ntBASIC19.55■□□□□ 0.72
Sox3P53784 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox3P53784 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sox3P53784 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sox3P53784 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sox3P53784 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Sox3P53784 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.54■□□□□ 0.72
Sox3P53784 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sox3P53784 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sox3P53784 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.54■□□□□ 0.72
Sox3P53784 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sox3P53784 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox3P53784 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox3P53784 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sox3P53784 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Sox3P53784 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.53■□□□□ 0.72
Sox3P53784 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.53■□□□□ 0.72
Sox3P53784 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.53■□□□□ 0.72
Sox3P53784 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox3P53784 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.53■□□□□ 0.72
Sox3P53784 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox3P53784 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox3P53784 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox3P53784 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox3P53784 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox3P53784 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.52■□□□□ 0.72
Sox3P53784 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.52■□□□□ 0.72
Sox3P53784 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.52■□□□□ 0.72
Sox3P53784 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Sox3P53784 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sox3P53784 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.52■□□□□ 0.72
Sox3P53784 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox3P53784 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Sox3P53784 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox3P53784 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sox3P53784 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.52■□□□□ 0.71
Sox3P53784 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Sox3P53784 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox3P53784 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox3P53784 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox3P53784 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox3P53784 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Sox3P53784 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox3P53784 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.51■□□□□ 0.71
Sox3P53784 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.51■□□□□ 0.71
Sox3P53784 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox3P53784 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox3P53784 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox3P53784 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox3P53784 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sox3P53784 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.5■□□□□ 0.71
Sox3P53784 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.5■□□□□ 0.71
Sox3P53784 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Sox3P53784 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Sox3P53784 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Sox3P53784 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sox3P53784 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox3P53784 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.49■□□□□ 0.71
Sox3P53784 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.49■□□□□ 0.71
Sox3P53784 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox3P53784 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Sox3P53784 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Sox3P53784 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox3P53784 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox3P53784 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox3P53784 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Sox3P53784 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sox3P53784 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox3P53784 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox3P53784 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox3P53784 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sox3P53784 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.47■□□□□ 0.71
Sox3P53784 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Sox3P53784 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.47■□□□□ 0.71
Sox3P53784 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.47■□□□□ 0.71
Sox3P53784 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sox3P53784 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox3P53784 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox3P53784 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sox3P53784 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox3P53784 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox3P53784 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox3P53784 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.46■□□□□ 0.71
Sox3P53784 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Sox3P53784 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox3P53784 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.46■□□□□ 0.71
Sox3P53784 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms