Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pdx1P52946 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pdx1P52946 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pdx1P52946 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Pdx1P52946 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pdx1P52946 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pdx1P52946 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pdx1P52946 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.34■□□□□ 0.85
Pdx1P52946 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pdx1P52946 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.34■□□□□ 0.85
Pdx1P52946 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pdx1P52946 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pdx1P52946 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Pdx1P52946 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.33■□□□□ 0.85
Pdx1P52946 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.33■□□□□ 0.85
Pdx1P52946 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Pdx1P52946 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pdx1P52946 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pdx1P52946 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Pdx1P52946 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pdx1P52946 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Pdx1P52946 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Pdx1P52946 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pdx1P52946 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pdx1P52946 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pdx1P52946 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pdx1P52946 Gm22238-201ENSMUST00000175222 88 ntBASIC20.32■□□□□ 0.84
Pdx1P52946 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.32■□□□□ 0.84
Pdx1P52946 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.32■□□□□ 0.84
Pdx1P52946 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Pdx1P52946 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pdx1P52946 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
Pdx1P52946 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pdx1P52946 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Pdx1P52946 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pdx1P52946 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.31■□□□□ 0.84
Pdx1P52946 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
Pdx1P52946 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Pdx1P52946 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.31■□□□□ 0.84
Pdx1P52946 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pdx1P52946 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pdx1P52946 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.31■□□□□ 0.84
Pdx1P52946 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pdx1P52946 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pdx1P52946 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pdx1P52946 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pdx1P52946 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.3■□□□□ 0.84
Pdx1P52946 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
Pdx1P52946 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pdx1P52946 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.3■□□□□ 0.84
Pdx1P52946 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pdx1P52946 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
Pdx1P52946 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdx1P52946 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdx1P52946 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdx1P52946 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.29■□□□□ 0.84
Pdx1P52946 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Pdx1P52946 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdx1P52946 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdx1P52946 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdx1P52946 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pdx1P52946 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Pdx1P52946 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Pdx1P52946 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pdx1P52946 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pdx1P52946 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pdx1P52946 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pdx1P52946 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.27■□□□□ 0.84
Pdx1P52946 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pdx1P52946 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pdx1P52946 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pdx1P52946 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pdx1P52946 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pdx1P52946 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.27■□□□□ 0.84
Pdx1P52946 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pdx1P52946 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pdx1P52946 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdx1P52946 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdx1P52946 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdx1P52946 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdx1P52946 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pdx1P52946 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pdx1P52946 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdx1P52946 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pdx1P52946 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pdx1P52946 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Pdx1P52946 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Pdx1P52946 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pdx1P52946 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.25■□□□□ 0.83
Pdx1P52946 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pdx1P52946 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pdx1P52946 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdx1P52946 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdx1P52946 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdx1P52946 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pdx1P52946 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdx1P52946 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.24■□□□□ 0.83
Pdx1P52946 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Pdx1P52946 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Pdx1P52946 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms