Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RoraP51448 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.41■□□□□ 0.7
RoraP51448 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RoraP51448 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RoraP51448 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.4■□□□□ 0.7
RoraP51448 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RoraP51448 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RoraP51448 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.4■□□□□ 0.7
RoraP51448 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RoraP51448 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RoraP51448 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RoraP51448 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RoraP51448 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RoraP51448 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
RoraP51448 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RoraP51448 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
RoraP51448 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RoraP51448 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RoraP51448 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RoraP51448 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.39■□□□□ 0.69
RoraP51448 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RoraP51448 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.39■□□□□ 0.69
RoraP51448 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.39■□□□□ 0.69
RoraP51448 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RoraP51448 Gm45417-201ENSMUST00000209533 758 ntBASIC19.39■□□□□ 0.69
RoraP51448 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RoraP51448 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.39■□□□□ 0.69
RoraP51448 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RoraP51448 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RoraP51448 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RoraP51448 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RoraP51448 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RoraP51448 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RoraP51448 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.38■□□□□ 0.69
RoraP51448 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.38■□□□□ 0.69
RoraP51448 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RoraP51448 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RoraP51448 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
RoraP51448 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RoraP51448 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RoraP51448 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RoraP51448 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RoraP51448 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RoraP51448 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RoraP51448 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
RoraP51448 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RoraP51448 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RoraP51448 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RoraP51448 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.37■□□□□ 0.69
RoraP51448 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RoraP51448 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RoraP51448 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RoraP51448 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RoraP51448 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RoraP51448 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RoraP51448 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RoraP51448 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RoraP51448 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RoraP51448 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RoraP51448 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RoraP51448 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.36■□□□□ 0.69
RoraP51448 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RoraP51448 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
RoraP51448 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RoraP51448 Gm7143-201ENSMUST00000222811 859 ntBASIC19.35■□□□□ 0.69
RoraP51448 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RoraP51448 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RoraP51448 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RoraP51448 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RoraP51448 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RoraP51448 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
RoraP51448 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RoraP51448 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RoraP51448 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.34■□□□□ 0.69
RoraP51448 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.34■□□□□ 0.69
RoraP51448 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RoraP51448 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RoraP51448 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RoraP51448 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.34■□□□□ 0.69
RoraP51448 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.34■□□□□ 0.69
RoraP51448 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.34■□□□□ 0.69
RoraP51448 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RoraP51448 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RoraP51448 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RoraP51448 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RoraP51448 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RoraP51448 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RoraP51448 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RoraP51448 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RoraP51448 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RoraP51448 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RoraP51448 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RoraP51448 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RoraP51448 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RoraP51448 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RoraP51448 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RoraP51448 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.32■□□□□ 0.68
RoraP51448 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RoraP51448 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RoraP51448 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms