Protein–RNA interactions for Protein: P47955

Rplp1, 60S acidic ribosomal protein P1, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rplp1P47955 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rplp1P47955 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rplp1P47955 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rplp1P47955 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rplp1P47955 Gm14117-201ENSMUST00000122417 843 ntBASIC16.77■□□□□ 0.28
Rplp1P47955 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.77■□□□□ 0.28
Rplp1P47955 Gm45102-201ENSMUST00000207427 857 ntBASIC16.77■□□□□ 0.28
Rplp1P47955 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rplp1P47955 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rplp1P47955 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rplp1P47955 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rplp1P47955 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.77■□□□□ 0.27
Rplp1P47955 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rplp1P47955 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rplp1P47955 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rplp1P47955 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rplp1P47955 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rplp1P47955 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rplp1P47955 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.76■□□□□ 0.27
Rplp1P47955 Etf1-202ENSMUST00000180351 108 ntBASIC16.76■□□□□ 0.27
Rplp1P47955 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.76■□□□□ 0.27
Rplp1P47955 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.76■□□□□ 0.27
Rplp1P47955 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.76■□□□□ 0.27
Rplp1P47955 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rplp1P47955 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.76■□□□□ 0.27
Rplp1P47955 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Rplp1P47955 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rplp1P47955 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Rplp1P47955 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rplp1P47955 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rplp1P47955 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rplp1P47955 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rplp1P47955 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.75■□□□□ 0.27
Rplp1P47955 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.75■□□□□ 0.27
Rplp1P47955 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.75■□□□□ 0.27
Rplp1P47955 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.75■□□□□ 0.27
Rplp1P47955 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rplp1P47955 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rplp1P47955 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rplp1P47955 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
Rplp1P47955 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rplp1P47955 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rplp1P47955 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rplp1P47955 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rplp1P47955 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.74■□□□□ 0.27
Rplp1P47955 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rplp1P47955 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.74■□□□□ 0.27
Rplp1P47955 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rplp1P47955 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Rplp1P47955 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rplp1P47955 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Rplp1P47955 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rplp1P47955 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.74■□□□□ 0.27
Rplp1P47955 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rplp1P47955 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rplp1P47955 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Rplp1P47955 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Rplp1P47955 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rplp1P47955 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rplp1P47955 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rplp1P47955 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Rplp1P47955 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rplp1P47955 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Rplp1P47955 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rplp1P47955 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rplp1P47955 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rplp1P47955 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rplp1P47955 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rplp1P47955 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rplp1P47955 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.72■□□□□ 0.27
Rplp1P47955 Gm10399-202ENSMUST00000202768 748 ntBASIC16.72■□□□□ 0.27
Rplp1P47955 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rplp1P47955 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rplp1P47955 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.72■□□□□ 0.27
Rplp1P47955 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rplp1P47955 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rplp1P47955 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.71■□□□□ 0.27
Rplp1P47955 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rplp1P47955 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rplp1P47955 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rplp1P47955 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rplp1P47955 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rplp1P47955 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rplp1P47955 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rplp1P47955 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rplp1P47955 Gm7417-201ENSMUST00000192950 473 ntBASIC16.7■□□□□ 0.26
Rplp1P47955 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.7■□□□□ 0.26
Rplp1P47955 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rplp1P47955 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rplp1P47955 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rplp1P47955 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Rplp1P47955 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rplp1P47955 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.69■□□□□ 0.26
Rplp1P47955 Gm40881-201ENSMUST00000223397 166 ntBASIC16.69■□□□□ 0.26
Rplp1P47955 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Rplp1P47955 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rplp1P47955 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Rplp1P47955 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.68■□□□□ 0.26
Rplp1P47955 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rplp1P47955 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms