Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Sox18P43680 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Sox18P43680 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox18P43680 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox18P43680 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox18P43680 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sox18P43680 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.74■□□□□ 0.75
Sox18P43680 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sox18P43680 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox18P43680 Spcs1-204ENSMUST00000226782 949 ntBASIC19.74■□□□□ 0.75
Sox18P43680 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox18P43680 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox18P43680 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Sox18P43680 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sox18P43680 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox18P43680 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sox18P43680 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sox18P43680 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox18P43680 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox18P43680 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sox18P43680 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox18P43680 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox18P43680 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sox18P43680 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sox18P43680 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox18P43680 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Sox18P43680 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Sox18P43680 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox18P43680 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox18P43680 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Sox18P43680 Gm18671-201ENSMUST00000214826 683 ntBASIC19.71■□□□□ 0.75
Sox18P43680 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.71■□□□□ 0.75
Sox18P43680 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox18P43680 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox18P43680 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sox18P43680 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.7■□□□□ 0.74
Sox18P43680 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox18P43680 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.7■□□□□ 0.74
Sox18P43680 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
Sox18P43680 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.7■□□□□ 0.74
Sox18P43680 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.7■□□□□ 0.74
Sox18P43680 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.7■□□□□ 0.74
Sox18P43680 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sox18P43680 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox18P43680 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox18P43680 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox18P43680 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Sox18P43680 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Sox18P43680 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sox18P43680 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox18P43680 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox18P43680 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sox18P43680 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Sox18P43680 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox18P43680 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox18P43680 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sox18P43680 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Sox18P43680 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.67■□□□□ 0.74
Sox18P43680 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox18P43680 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Sox18P43680 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.67■□□□□ 0.74
Sox18P43680 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sox18P43680 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Sox18P43680 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox18P43680 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.66■□□□□ 0.74
Sox18P43680 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Sox18P43680 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox18P43680 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sox18P43680 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox18P43680 AV356131-201ENSMUST00000206201 750 ntBASIC19.66■□□□□ 0.74
Sox18P43680 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox18P43680 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Sox18P43680 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox18P43680 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox18P43680 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Sox18P43680 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox18P43680 Gm10033-202ENSMUST00000211874 928 ntBASIC19.65■□□□□ 0.74
Sox18P43680 Gm40848-201ENSMUST00000221998 324 ntBASIC19.65■□□□□ 0.74
Sox18P43680 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox18P43680 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox18P43680 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sox18P43680 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Sox18P43680 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.64■□□□□ 0.73
Sox18P43680 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.64■□□□□ 0.73
Sox18P43680 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox18P43680 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox18P43680 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sox18P43680 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.64■□□□□ 0.73
Sox18P43680 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox18P43680 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox18P43680 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox18P43680 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Sox18P43680 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Sox18P43680 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Sox18P43680 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox18P43680 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox18P43680 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox18P43680 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox18P43680 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.63■□□□□ 0.73
Sox18P43680 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms