Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.43■□□□□ 0.7
Slc6a11P31650 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.43■□□□□ 0.7
Slc6a11P31650 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc6a11P31650 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc6a11P31650 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Slc6a11P31650 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Slc6a11P31650 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Slc6a11P31650 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a11P31650 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a11P31650 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a11P31650 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a11P31650 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a11P31650 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a11P31650 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a11P31650 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.42■□□□□ 0.7
Slc6a11P31650 Etf1-202ENSMUST00000180351 108 ntBASIC19.42■□□□□ 0.7
Slc6a11P31650 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a11P31650 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Slc6a11P31650 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
Slc6a11P31650 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a11P31650 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.42■□□□□ 0.7
Slc6a11P31650 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Slc6a11P31650 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a11P31650 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a11P31650 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Slc6a11P31650 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a11P31650 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a11P31650 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.41■□□□□ 0.7
Slc6a11P31650 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Slc6a11P31650 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a11P31650 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a11P31650 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a11P31650 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a11P31650 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a11P31650 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Slc6a11P31650 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Slc6a11P31650 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a11P31650 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a11P31650 Gm10232-201ENSMUST00000089221 720 ntBASIC19.4■□□□□ 0.7
Slc6a11P31650 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Slc6a11P31650 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a11P31650 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Slc6a11P31650 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a11P31650 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a11P31650 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.39■□□□□ 0.69
Slc6a11P31650 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a11P31650 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Slc6a11P31650 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a11P31650 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a11P31650 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a11P31650 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a11P31650 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.38■□□□□ 0.69
Slc6a11P31650 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a11P31650 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a11P31650 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.38■□□□□ 0.69
Slc6a11P31650 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a11P31650 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a11P31650 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a11P31650 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a11P31650 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a11P31650 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a11P31650 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a11P31650 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a11P31650 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.37■□□□□ 0.69
Slc6a11P31650 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a11P31650 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a11P31650 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a11P31650 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a11P31650 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a11P31650 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a11P31650 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a11P31650 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a11P31650 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.36■□□□□ 0.69
Slc6a11P31650 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Slc6a11P31650 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a11P31650 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a11P31650 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a11P31650 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a11P31650 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Slc6a11P31650 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a11P31650 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.35■□□□□ 0.69
Slc6a11P31650 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a11P31650 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a11P31650 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a11P31650 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a11P31650 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a11P31650 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.35■□□□□ 0.69
Slc6a11P31650 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a11P31650 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a11P31650 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a11P31650 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a11P31650 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a11P31650 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.35■□□□□ 0.69
Slc6a11P31650 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a11P31650 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.34■□□□□ 0.69
Slc6a11P31650 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Slc6a11P31650 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a11P31650 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a11P31650 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a11P31650 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms