Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Terc-201ENSMUST00000082862 423 ntBASIC18.97■□□□□ 0.63
Nedd8P29595 Gm4799-201ENSMUST00000095396 657 ntBASIC18.97■□□□□ 0.63
Nedd8P29595 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Nedd8P29595 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nedd8P29595 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.97■□□□□ 0.63
Nedd8P29595 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nedd8P29595 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Nedd8P29595 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nedd8P29595 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nedd8P29595 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nedd8P29595 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Nedd8P29595 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nedd8P29595 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Nedd8P29595 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nedd8P29595 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nedd8P29595 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Nedd8P29595 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nedd8P29595 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nedd8P29595 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.96■□□□□ 0.63
Nedd8P29595 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nedd8P29595 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.95■□□□□ 0.62
Nedd8P29595 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nedd8P29595 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nedd8P29595 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nedd8P29595 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nedd8P29595 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nedd8P29595 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Nedd8P29595 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nedd8P29595 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nedd8P29595 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nedd8P29595 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nedd8P29595 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.95■□□□□ 0.62
Nedd8P29595 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nedd8P29595 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nedd8P29595 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nedd8P29595 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nedd8P29595 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nedd8P29595 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nedd8P29595 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.94■□□□□ 0.62
Nedd8P29595 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nedd8P29595 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nedd8P29595 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nedd8P29595 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.94■□□□□ 0.62
Nedd8P29595 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nedd8P29595 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nedd8P29595 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nedd8P29595 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.93■□□□□ 0.62
Nedd8P29595 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nedd8P29595 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nedd8P29595 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nedd8P29595 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nedd8P29595 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nedd8P29595 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nedd8P29595 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nedd8P29595 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nedd8P29595 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Nedd8P29595 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Nedd8P29595 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.92■□□□□ 0.62
Nedd8P29595 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nedd8P29595 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nedd8P29595 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nedd8P29595 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nedd8P29595 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nedd8P29595 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nedd8P29595 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.92■□□□□ 0.62
Nedd8P29595 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nedd8P29595 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nedd8P29595 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nedd8P29595 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nedd8P29595 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nedd8P29595 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nedd8P29595 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nedd8P29595 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nedd8P29595 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Nedd8P29595 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.91■□□□□ 0.62
Nedd8P29595 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nedd8P29595 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.91■□□□□ 0.62
Nedd8P29595 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nedd8P29595 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nedd8P29595 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nedd8P29595 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nedd8P29595 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nedd8P29595 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Nedd8P29595 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.9■□□□□ 0.62
Nedd8P29595 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Nedd8P29595 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.9■□□□□ 0.62
Nedd8P29595 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nedd8P29595 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nedd8P29595 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nedd8P29595 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Nedd8P29595 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nedd8P29595 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nedd8P29595 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Nedd8P29595 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nedd8P29595 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nedd8P29595 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nedd8P29595 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nedd8P29595 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Nedd8P29595 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nedd8P29595 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 114.8 ms