Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.71■□□□□ 0.91
RxrbP28704 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RxrbP28704 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.71■□□□□ 0.91
RxrbP28704 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RxrbP28704 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RxrbP28704 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RxrbP28704 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RxrbP28704 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RxrbP28704 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RxrbP28704 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RxrbP28704 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RxrbP28704 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RxrbP28704 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.7■□□□□ 0.9
RxrbP28704 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RxrbP28704 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RxrbP28704 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RxrbP28704 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RxrbP28704 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RxrbP28704 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RxrbP28704 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.69■□□□□ 0.9
RxrbP28704 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RxrbP28704 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.68■□□□□ 0.9
RxrbP28704 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RxrbP28704 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RxrbP28704 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RxrbP28704 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RxrbP28704 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RxrbP28704 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RxrbP28704 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RxrbP28704 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RxrbP28704 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RxrbP28704 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RxrbP28704 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RxrbP28704 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RxrbP28704 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.67■□□□□ 0.9
RxrbP28704 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RxrbP28704 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RxrbP28704 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RxrbP28704 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RxrbP28704 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RxrbP28704 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RxrbP28704 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RxrbP28704 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RxrbP28704 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RxrbP28704 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RxrbP28704 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.65■□□□□ 0.9
RxrbP28704 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RxrbP28704 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.65■□□□□ 0.9
RxrbP28704 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RxrbP28704 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RxrbP28704 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.64■□□□□ 0.9
RxrbP28704 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RxrbP28704 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RxrbP28704 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RxrbP28704 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RxrbP28704 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RxrbP28704 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RxrbP28704 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.64■□□□□ 0.89
RxrbP28704 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RxrbP28704 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RxrbP28704 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RxrbP28704 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RxrbP28704 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RxrbP28704 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RxrbP28704 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RxrbP28704 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.63■□□□□ 0.89
RxrbP28704 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RxrbP28704 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.63■□□□□ 0.89
RxrbP28704 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RxrbP28704 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RxrbP28704 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RxrbP28704 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RxrbP28704 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RxrbP28704 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.62■□□□□ 0.89
RxrbP28704 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RxrbP28704 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RxrbP28704 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.62■□□□□ 0.89
RxrbP28704 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RxrbP28704 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RxrbP28704 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RxrbP28704 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RxrbP28704 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RxrbP28704 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RxrbP28704 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RxrbP28704 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RxrbP28704 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RxrbP28704 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RxrbP28704 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.61■□□□□ 0.89
RxrbP28704 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RxrbP28704 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RxrbP28704 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RxrbP28704 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RxrbP28704 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RxrbP28704 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RxrbP28704 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RxrbP28704 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RxrbP28704 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RxrbP28704 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RxrbP28704 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RxrbP28704 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms