Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd40P27512 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd40P27512 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cd40P27512 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd40P27512 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd40P27512 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cd40P27512 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd40P27512 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.65■□□□□ 0.58
Cd40P27512 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Cd40P27512 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cd40P27512 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cd40P27512 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cd40P27512 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.64■□□□□ 0.57
Cd40P27512 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cd40P27512 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.64■□□□□ 0.57
Cd40P27512 Gm7143-201ENSMUST00000222811 859 ntBASIC18.64■□□□□ 0.57
Cd40P27512 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cd40P27512 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cd40P27512 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cd40P27512 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd40P27512 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Cd40P27512 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd40P27512 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Cd40P27512 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd40P27512 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd40P27512 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.63■□□□□ 0.57
Cd40P27512 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd40P27512 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cd40P27512 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cd40P27512 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd40P27512 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
Cd40P27512 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.62■□□□□ 0.57
Cd40P27512 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cd40P27512 Gm22238-201ENSMUST00000175222 88 ntBASIC18.62■□□□□ 0.57
Cd40P27512 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cd40P27512 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd40P27512 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd40P27512 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd40P27512 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Cd40P27512 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd40P27512 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd40P27512 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd40P27512 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd40P27512 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd40P27512 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd40P27512 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd40P27512 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd40P27512 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.61■□□□□ 0.57
Cd40P27512 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Cd40P27512 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.61■□□□□ 0.57
Cd40P27512 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd40P27512 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cd40P27512 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Cd40P27512 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.6■□□□□ 0.57
Cd40P27512 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Cd40P27512 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.6■□□□□ 0.57
Cd40P27512 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cd40P27512 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cd40P27512 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cd40P27512 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cd40P27512 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.59■□□□□ 0.57
Cd40P27512 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cd40P27512 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cd40P27512 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cd40P27512 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cd40P27512 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.58■□□□□ 0.57
Cd40P27512 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cd40P27512 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cd40P27512 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cd40P27512 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cd40P27512 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cd40P27512 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cd40P27512 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cd40P27512 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.57■□□□□ 0.56
Cd40P27512 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd40P27512 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.57■□□□□ 0.56
Cd40P27512 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
Cd40P27512 Gm9870-201ENSMUST00000063874 645 ntBASIC18.57■□□□□ 0.56
Cd40P27512 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd40P27512 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd40P27512 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.56■□□□□ 0.56
Cd40P27512 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd40P27512 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd40P27512 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cd40P27512 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd40P27512 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cd40P27512 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cd40P27512 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cd40P27512 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd40P27512 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd40P27512 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd40P27512 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd40P27512 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd40P27512 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cd40P27512 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cd40P27512 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.55■□□□□ 0.56
Cd40P27512 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.55■□□□□ 0.56
Cd40P27512 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.55■□□□□ 0.56
Cd40P27512 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cd40P27512 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms