Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col8a2P25318 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.22■□□□□ 0.35
Col8a2P25318 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.22■□□□□ 0.35
Col8a2P25318 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
Col8a2P25318 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col8a2P25318 Gm13241-201ENSMUST00000094493 780 ntBASIC17.22■□□□□ 0.35
Col8a2P25318 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col8a2P25318 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col8a2P25318 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col8a2P25318 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Col8a2P25318 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Col8a2P25318 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.21■□□□□ 0.35
Col8a2P25318 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col8a2P25318 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col8a2P25318 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col8a2P25318 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col8a2P25318 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col8a2P25318 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col8a2P25318 Gm9870-201ENSMUST00000063874 645 ntBASIC17.21■□□□□ 0.35
Col8a2P25318 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.21■□□□□ 0.35
Col8a2P25318 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col8a2P25318 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col8a2P25318 Gm12922-201ENSMUST00000120626 809 ntBASIC17.2■□□□□ 0.34
Col8a2P25318 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col8a2P25318 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
Col8a2P25318 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col8a2P25318 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col8a2P25318 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col8a2P25318 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.19■□□□□ 0.34
Col8a2P25318 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col8a2P25318 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col8a2P25318 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col8a2P25318 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col8a2P25318 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col8a2P25318 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col8a2P25318 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col8a2P25318 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col8a2P25318 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.18■□□□□ 0.34
Col8a2P25318 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col8a2P25318 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col8a2P25318 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col8a2P25318 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col8a2P25318 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col8a2P25318 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col8a2P25318 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col8a2P25318 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col8a2P25318 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Col8a2P25318 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.17■□□□□ 0.34
Col8a2P25318 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.17■□□□□ 0.34
Col8a2P25318 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.17■□□□□ 0.34
Col8a2P25318 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col8a2P25318 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col8a2P25318 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
Col8a2P25318 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col8a2P25318 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.17■□□□□ 0.34
Col8a2P25318 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.16■□□□□ 0.34
Col8a2P25318 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col8a2P25318 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Col8a2P25318 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col8a2P25318 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col8a2P25318 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col8a2P25318 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col8a2P25318 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col8a2P25318 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col8a2P25318 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col8a2P25318 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.16■□□□□ 0.34
Col8a2P25318 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Col8a2P25318 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.15■□□□□ 0.34
Col8a2P25318 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.15■□□□□ 0.34
Col8a2P25318 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col8a2P25318 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Col8a2P25318 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col8a2P25318 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col8a2P25318 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.14■□□□□ 0.33
Col8a2P25318 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col8a2P25318 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col8a2P25318 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Col8a2P25318 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Col8a2P25318 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col8a2P25318 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col8a2P25318 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col8a2P25318 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col8a2P25318 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col8a2P25318 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col8a2P25318 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col8a2P25318 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col8a2P25318 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col8a2P25318 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col8a2P25318 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col8a2P25318 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col8a2P25318 Gm15039-201ENSMUST00000118914 875 ntBASIC17.12■□□□□ 0.33
Col8a2P25318 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col8a2P25318 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.12■□□□□ 0.33
Col8a2P25318 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col8a2P25318 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col8a2P25318 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col8a2P25318 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col8a2P25318 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col8a2P25318 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col8a2P25318 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms