Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
P04214 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
P04214 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
P04214 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
P04214 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.92■■□□□ 1.1
P04214 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.92■■□□□ 1.1
P04214 Smad6-203ENSMUST00000179458 273 ntBASIC21.92■■□□□ 1.1
P04214 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
P04214 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
P04214 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
P04214 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
P04214 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
P04214 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
P04214 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
P04214 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
P04214 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
P04214 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
P04214 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
P04214 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
P04214 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
P04214 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
P04214 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
P04214 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
P04214 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.9■■□□□ 1.1
P04214 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
P04214 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
P04214 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
P04214 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.9■■□□□ 1.1
P04214 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
P04214 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.89■■□□□ 1.09
P04214 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
P04214 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
P04214 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
P04214 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.88■■□□□ 1.09
P04214 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
P04214 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
P04214 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
P04214 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
P04214 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
P04214 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
P04214 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.87■■□□□ 1.09
P04214 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
P04214 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
P04214 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
P04214 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.86■■□□□ 1.09
P04214 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
P04214 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
P04214 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
P04214 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
P04214 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.86■■□□□ 1.09
P04214 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.86■■□□□ 1.09
P04214 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.86■■□□□ 1.09
P04214 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
P04214 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
P04214 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
P04214 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
P04214 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
P04214 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
P04214 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
P04214 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
P04214 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
P04214 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
P04214 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.84■■□□□ 1.09
P04214 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.84■■□□□ 1.09
P04214 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
P04214 Gm27011-201ENSMUST00000182352 972 ntBASIC21.84■■□□□ 1.09
P04214 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
P04214 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
P04214 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
P04214 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
P04214 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.84■■□□□ 1.09
P04214 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
P04214 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
P04214 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
P04214 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.83■■□□□ 1.09
P04214 Gm10033-202ENSMUST00000211874 928 ntBASIC21.83■■□□□ 1.09
P04214 Gm18671-201ENSMUST00000214826 683 ntBASIC21.83■■□□□ 1.09
P04214 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
P04214 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
P04214 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
P04214 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
P04214 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.82■■□□□ 1.08
P04214 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.82■■□□□ 1.08
P04214 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
P04214 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
P04214 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
P04214 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
P04214 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
P04214 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
P04214 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.81■■□□□ 1.08
P04214 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.81■■□□□ 1.08
P04214 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
P04214 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
P04214 AV356131-201ENSMUST00000206201 750 ntBASIC21.8■■□□□ 1.08
P04214 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
P04214 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
P04214 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
P04214 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
P04214 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
P04214 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms