Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC25.85■■□□□ 1.73
Col4a1P02463 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC25.85■■□□□ 1.73
Col4a1P02463 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC25.85■■□□□ 1.73
Col4a1P02463 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC25.85■■□□□ 1.73
Col4a1P02463 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Col4a1P02463 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Col4a1P02463 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Col4a1P02463 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Col4a1P02463 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Col4a1P02463 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Col4a1P02463 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC25.84■■□□□ 1.73
Col4a1P02463 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Col4a1P02463 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Col4a1P02463 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Col4a1P02463 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Col4a1P02463 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Col4a1P02463 Gm29257-201ENSMUST00000186115 639 ntBASIC25.83■■□□□ 1.73
Col4a1P02463 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC25.83■■□□□ 1.73
Col4a1P02463 Spcs1-204ENSMUST00000226782 949 ntBASIC25.83■■□□□ 1.73
Col4a1P02463 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
Col4a1P02463 Gm5576-201ENSMUST00000075809 1236 ntBASIC25.83■■□□□ 1.73
Col4a1P02463 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Col4a1P02463 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Col4a1P02463 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
Col4a1P02463 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Col4a1P02463 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Col4a1P02463 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
Col4a1P02463 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Col4a1P02463 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Col4a1P02463 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Col4a1P02463 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Col4a1P02463 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Col4a1P02463 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC25.81■■□□□ 1.72
Col4a1P02463 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Col4a1P02463 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
Col4a1P02463 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Col4a1P02463 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
Col4a1P02463 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
Col4a1P02463 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Col4a1P02463 AC166356.1-201ENSMUST00000228236 1426 ntBASIC25.79■■□□□ 1.72
Col4a1P02463 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC25.79■■□□□ 1.72
Col4a1P02463 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
Col4a1P02463 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Col4a1P02463 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Col4a1P02463 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Col4a1P02463 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Col4a1P02463 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC25.78■■□□□ 1.72
Col4a1P02463 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Col4a1P02463 AC164629.5-201ENSMUST00000220387 632 ntBASIC25.78■■□□□ 1.72
Col4a1P02463 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Col4a1P02463 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Col4a1P02463 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
Col4a1P02463 Gm43759-201ENSMUST00000196925 1261 ntBASIC25.77■■□□□ 1.72
Col4a1P02463 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
Col4a1P02463 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
Col4a1P02463 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Col4a1P02463 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
Col4a1P02463 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Col4a1P02463 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Col4a1P02463 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC25.77■■□□□ 1.72
Col4a1P02463 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Col4a1P02463 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC25.77■■□□□ 1.72
Col4a1P02463 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
Col4a1P02463 Gm5297-201ENSMUST00000198555 1171 ntBASIC25.77■■□□□ 1.72
Col4a1P02463 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC25.77■■□□□ 1.72
Col4a1P02463 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Col4a1P02463 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Col4a1P02463 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC25.76■■□□□ 1.71
Col4a1P02463 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Col4a1P02463 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Col4a1P02463 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Col4a1P02463 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Col4a1P02463 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Col4a1P02463 AC164883.3-201ENSMUST00000227396 1774 ntBASIC25.75■■□□□ 1.71
Col4a1P02463 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Col4a1P02463 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC25.75■■□□□ 1.71
Col4a1P02463 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Col4a1P02463 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC25.75■■□□□ 1.71
Col4a1P02463 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Col4a1P02463 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC25.74■■□□□ 1.71
Col4a1P02463 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Col4a1P02463 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Col4a1P02463 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC25.74■■□□□ 1.71
Col4a1P02463 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC25.74■■□□□ 1.71
Col4a1P02463 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC25.74■■□□□ 1.71
Col4a1P02463 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Col4a1P02463 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Col4a1P02463 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Col4a1P02463 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC25.73■■□□□ 1.71
Col4a1P02463 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC25.72■■□□□ 1.71
Col4a1P02463 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Col4a1P02463 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC25.72■■□□□ 1.71
Col4a1P02463 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC25.72■■□□□ 1.71
Col4a1P02463 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Col4a1P02463 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC25.72■■□□□ 1.71
Col4a1P02463 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Col4a1P02463 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Col4a1P02463 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Col4a1P02463 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Col4a1P02463 Gm40848-201ENSMUST00000221998 324 ntBASIC25.71■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms