Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.58■□□□□ 0.4
H3f3cP02301 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
H3f3cP02301 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
H3f3cP02301 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
H3f3cP02301 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
H3f3cP02301 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
H3f3cP02301 Etf1-202ENSMUST00000180351 108 ntBASIC17.57■□□□□ 0.4
H3f3cP02301 Rps24-207ENSMUST00000224568 714 ntBASIC17.57■□□□□ 0.4
H3f3cP02301 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H3f3cP02301 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H3f3cP02301 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
H3f3cP02301 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
H3f3cP02301 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
H3f3cP02301 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H3f3cP02301 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.56■□□□□ 0.4
H3f3cP02301 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
H3f3cP02301 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H3f3cP02301 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.56■□□□□ 0.4
H3f3cP02301 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H3f3cP02301 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
H3f3cP02301 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
H3f3cP02301 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
H3f3cP02301 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
H3f3cP02301 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
H3f3cP02301 Gm7417-201ENSMUST00000192950 473 ntBASIC17.55■□□□□ 0.4
H3f3cP02301 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.55■□□□□ 0.4
H3f3cP02301 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
H3f3cP02301 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
H3f3cP02301 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
H3f3cP02301 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
H3f3cP02301 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.55■□□□□ 0.4
H3f3cP02301 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H3f3cP02301 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.54■□□□□ 0.4
H3f3cP02301 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H3f3cP02301 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H3f3cP02301 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
H3f3cP02301 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
H3f3cP02301 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.54■□□□□ 0.4
H3f3cP02301 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
H3f3cP02301 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
H3f3cP02301 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H3f3cP02301 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
H3f3cP02301 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.53■□□□□ 0.4
H3f3cP02301 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
H3f3cP02301 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.53■□□□□ 0.4
H3f3cP02301 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
H3f3cP02301 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.52■□□□□ 0.4
H3f3cP02301 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
H3f3cP02301 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.52■□□□□ 0.4
H3f3cP02301 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
H3f3cP02301 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
H3f3cP02301 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
H3f3cP02301 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
H3f3cP02301 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
H3f3cP02301 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
H3f3cP02301 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
H3f3cP02301 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H3f3cP02301 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
H3f3cP02301 Gm14117-201ENSMUST00000122417 843 ntBASIC17.51■□□□□ 0.39
H3f3cP02301 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H3f3cP02301 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H3f3cP02301 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
H3f3cP02301 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3f3cP02301 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3f3cP02301 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3f3cP02301 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3f3cP02301 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3f3cP02301 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3f3cP02301 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3f3cP02301 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
H3f3cP02301 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
H3f3cP02301 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3f3cP02301 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.5■□□□□ 0.39
H3f3cP02301 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3f3cP02301 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
H3f3cP02301 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3f3cP02301 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.49■□□□□ 0.39
H3f3cP02301 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
H3f3cP02301 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
H3f3cP02301 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.49■□□□□ 0.39
H3f3cP02301 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.49■□□□□ 0.39
H3f3cP02301 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
H3f3cP02301 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
H3f3cP02301 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
H3f3cP02301 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
H3f3cP02301 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
H3f3cP02301 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
H3f3cP02301 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
H3f3cP02301 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
H3f3cP02301 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
H3f3cP02301 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
H3f3cP02301 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
H3f3cP02301 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
H3f3cP02301 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
H3f3cP02301 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
H3f3cP02301 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
H3f3cP02301 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.48■□□□□ 0.39
H3f3cP02301 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.48■□□□□ 0.39
H3f3cP02301 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
H3f3cP02301 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms