Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TcraP01849 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TcraP01849 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TcraP01849 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TcraP01849 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TcraP01849 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TcraP01849 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TcraP01849 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TcraP01849 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TcraP01849 AC167019.3-201ENSMUST00000228225 1266 ntBASIC14.9□□□□□ -0.02
TcraP01849 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TcraP01849 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TcraP01849 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC14.9□□□□□ -0.02
TcraP01849 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TcraP01849 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TcraP01849 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TcraP01849 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TcraP01849 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TcraP01849 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
TcraP01849 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TcraP01849 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC14.89□□□□□ -0.03
TcraP01849 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TcraP01849 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TcraP01849 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TcraP01849 Gm45364-201ENSMUST00000210883 159 ntBASIC14.89□□□□□ -0.03
TcraP01849 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TcraP01849 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TcraP01849 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TcraP01849 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TcraP01849 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TcraP01849 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC14.89□□□□□ -0.03
TcraP01849 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TcraP01849 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TcraP01849 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TcraP01849 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TcraP01849 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TcraP01849 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TcraP01849 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TcraP01849 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TcraP01849 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC14.88□□□□□ -0.03
TcraP01849 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TcraP01849 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TcraP01849 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TcraP01849 Pkd1-207ENSMUST00000228550 1050 ntBASIC14.88□□□□□ -0.03
TcraP01849 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TcraP01849 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TcraP01849 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TcraP01849 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TcraP01849 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TcraP01849 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TcraP01849 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.88□□□□□ -0.03
TcraP01849 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TcraP01849 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TcraP01849 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TcraP01849 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TcraP01849 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TcraP01849 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TcraP01849 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TcraP01849 Terc-201ENSMUST00000082862 423 ntBASIC14.87□□□□□ -0.03
TcraP01849 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TcraP01849 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TcraP01849 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC14.86□□□□□ -0.03
TcraP01849 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TcraP01849 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TcraP01849 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TcraP01849 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TcraP01849 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TcraP01849 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC14.86□□□□□ -0.03
TcraP01849 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TcraP01849 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TcraP01849 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
TcraP01849 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TcraP01849 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TcraP01849 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TcraP01849 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TcraP01849 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TcraP01849 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC14.85□□□□□ -0.03
TcraP01849 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TcraP01849 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC14.85□□□□□ -0.03
TcraP01849 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC14.85□□□□□ -0.03
TcraP01849 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TcraP01849 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TcraP01849 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TcraP01849 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TcraP01849 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TcraP01849 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TcraP01849 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TcraP01849 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TcraP01849 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TcraP01849 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TcraP01849 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TcraP01849 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TcraP01849 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.84□□□□□ -0.03
TcraP01849 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TcraP01849 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TcraP01849 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC14.84□□□□□ -0.03
TcraP01849 Gm6311-201ENSMUST00000073790 878 ntBASIC14.84□□□□□ -0.03
TcraP01849 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TcraP01849 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TcraP01849 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.83□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms