Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ifna1P01572 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ifna1P01572 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.27■□□□□ 0.36
Ifna1P01572 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.27■□□□□ 0.36
Ifna1P01572 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Ifna1P01572 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ifna1P01572 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ifna1P01572 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ifna1P01572 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ifna1P01572 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ifna1P01572 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.26■□□□□ 0.35
Ifna1P01572 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ifna1P01572 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ifna1P01572 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ifna1P01572 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ifna1P01572 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ifna1P01572 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
Ifna1P01572 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ifna1P01572 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ifna1P01572 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ifna1P01572 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ifna1P01572 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ifna1P01572 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ifna1P01572 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ifna1P01572 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ifna1P01572 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ifna1P01572 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ifna1P01572 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ifna1P01572 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ifna1P01572 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ifna1P01572 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ifna1P01572 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ifna1P01572 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ifna1P01572 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.24■□□□□ 0.35
Ifna1P01572 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.24■□□□□ 0.35
Ifna1P01572 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ifna1P01572 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.24■□□□□ 0.35
Ifna1P01572 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Ifna1P01572 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ifna1P01572 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ifna1P01572 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ifna1P01572 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ifna1P01572 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ifna1P01572 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ifna1P01572 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ifna1P01572 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Ifna1P01572 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ifna1P01572 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.23■□□□□ 0.35
Ifna1P01572 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.23■□□□□ 0.35
Ifna1P01572 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ifna1P01572 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ifna1P01572 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ifna1P01572 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ifna1P01572 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ifna1P01572 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ifna1P01572 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ifna1P01572 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ifna1P01572 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ifna1P01572 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ifna1P01572 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ifna1P01572 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.22■□□□□ 0.35
Ifna1P01572 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ifna1P01572 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.22■□□□□ 0.35
Ifna1P01572 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Ifna1P01572 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ifna1P01572 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.22■□□□□ 0.35
Ifna1P01572 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ifna1P01572 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ifna1P01572 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Ifna1P01572 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ifna1P01572 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ifna1P01572 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.21■□□□□ 0.35
Ifna1P01572 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ifna1P01572 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ifna1P01572 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ifna1P01572 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ifna1P01572 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ifna1P01572 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ifna1P01572 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Ifna1P01572 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.21■□□□□ 0.34
Ifna1P01572 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.2■□□□□ 0.34
Ifna1P01572 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ifna1P01572 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ifna1P01572 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ifna1P01572 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.2■□□□□ 0.34
Ifna1P01572 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Ifna1P01572 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ifna1P01572 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ifna1P01572 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ifna1P01572 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ifna1P01572 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Ifna1P01572 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.19■□□□□ 0.34
Ifna1P01572 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ifna1P01572 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ifna1P01572 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ifna1P01572 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ifna1P01572 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ifna1P01572 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ifna1P01572 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ifna1P01572 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms