Protein–RNA interactions for Protein: P00397

Mtco1, Cytochrome c oxidase subunit 1, mousemouse

Predictions only

Length 514 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mtco1P00397 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Mtco1P00397 Gm43017-201ENSMUST00000198296 752 ntBASIC22.57■■□□□ 1.2
Mtco1P00397 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Mtco1P00397 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Mtco1P00397 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Mtco1P00397 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Mtco1P00397 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Mtco1P00397 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Mtco1P00397 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Mtco1P00397 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
Mtco1P00397 Gm43759-201ENSMUST00000196925 1261 ntBASIC22.56■■□□□ 1.2
Mtco1P00397 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Mtco1P00397 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Mtco1P00397 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Mtco1P00397 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC22.55■■□□□ 1.2
Mtco1P00397 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Mtco1P00397 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Mtco1P00397 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Mtco1P00397 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Mtco1P00397 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC22.54■■□□□ 1.2
Mtco1P00397 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Mtco1P00397 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Mtco1P00397 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Mtco1P00397 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.54■■□□□ 1.2
Mtco1P00397 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC22.54■■□□□ 1.2
Mtco1P00397 Gm8493-201ENSMUST00000196881 489 ntBASIC22.54■■□□□ 1.2
Mtco1P00397 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Mtco1P00397 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Mtco1P00397 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC22.53■■□□□ 1.2
Mtco1P00397 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Mtco1P00397 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC22.53■■□□□ 1.2
Mtco1P00397 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC22.53■■□□□ 1.2
Mtco1P00397 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC22.53■■□□□ 1.2
Mtco1P00397 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Mtco1P00397 Gm5576-201ENSMUST00000075809 1236 ntBASIC22.53■■□□□ 1.2
Mtco1P00397 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Mtco1P00397 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Mtco1P00397 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Mtco1P00397 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Mtco1P00397 AC166356.1-201ENSMUST00000228236 1426 ntBASIC22.52■■□□□ 1.2
Mtco1P00397 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Mtco1P00397 Gm43530-201ENSMUST00000195920 274 ntBASIC22.52■■□□□ 1.2
Mtco1P00397 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Mtco1P00397 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Mtco1P00397 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC22.52■■□□□ 1.2
Mtco1P00397 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Mtco1P00397 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Mtco1P00397 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Mtco1P00397 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Mtco1P00397 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Mtco1P00397 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Mtco1P00397 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
Mtco1P00397 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Mtco1P00397 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Mtco1P00397 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
Mtco1P00397 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Mtco1P00397 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Mtco1P00397 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Mtco1P00397 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Mtco1P00397 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Mtco1P00397 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Mtco1P00397 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Mtco1P00397 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Mtco1P00397 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Mtco1P00397 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Mtco1P00397 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Mtco1P00397 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Mtco1P00397 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Mtco1P00397 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Mtco1P00397 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Mtco1P00397 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Mtco1P00397 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.49■■□□□ 1.19
Mtco1P00397 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Mtco1P00397 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
Mtco1P00397 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Mtco1P00397 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC22.48■■□□□ 1.19
Mtco1P00397 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Mtco1P00397 Gm12251-201ENSMUST00000117893 792 ntBASIC22.48■■□□□ 1.19
Mtco1P00397 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC22.48■■□□□ 1.19
Mtco1P00397 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC22.48■■□□□ 1.19
Mtco1P00397 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
Mtco1P00397 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Mtco1P00397 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Mtco1P00397 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Mtco1P00397 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Mtco1P00397 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Mtco1P00397 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Mtco1P00397 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Mtco1P00397 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Mtco1P00397 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Mtco1P00397 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Mtco1P00397 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC22.47■■□□□ 1.19
Mtco1P00397 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
Mtco1P00397 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Mtco1P00397 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Mtco1P00397 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Mtco1P00397 Gm21168-201ENSMUST00000199646 1096 ntBASIC22.47■■□□□ 1.19
Mtco1P00397 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Mtco1P00397 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Mtco1P00397 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms