Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Abcd4O89016 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Abcd4O89016 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Abcd4O89016 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Abcd4O89016 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Abcd4O89016 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Abcd4O89016 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Abcd4O89016 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Abcd4O89016 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Abcd4O89016 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Abcd4O89016 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Abcd4O89016 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.48■□□□□ 0.55
Abcd4O89016 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Abcd4O89016 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Abcd4O89016 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.48■□□□□ 0.55
Abcd4O89016 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.48■□□□□ 0.55
Abcd4O89016 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Abcd4O89016 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Abcd4O89016 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Abcd4O89016 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Abcd4O89016 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.47■□□□□ 0.55
Abcd4O89016 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.47■□□□□ 0.55
Abcd4O89016 Golgb1-201ENSMUST00000023534 498 ntBASIC18.47■□□□□ 0.55
Abcd4O89016 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
Abcd4O89016 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Abcd4O89016 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Abcd4O89016 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Abcd4O89016 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Abcd4O89016 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Abcd4O89016 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Abcd4O89016 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Abcd4O89016 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Abcd4O89016 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Abcd4O89016 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Abcd4O89016 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.46■□□□□ 0.55
Abcd4O89016 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Abcd4O89016 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Abcd4O89016 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Abcd4O89016 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.45■□□□□ 0.54
Abcd4O89016 Gm12821-201ENSMUST00000120022 600 ntBASIC18.45■□□□□ 0.54
Abcd4O89016 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Abcd4O89016 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.45■□□□□ 0.54
Abcd4O89016 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.45■□□□□ 0.54
Abcd4O89016 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.45■□□□□ 0.54
Abcd4O89016 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.45■□□□□ 0.54
Abcd4O89016 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.45■□□□□ 0.54
Abcd4O89016 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.45■□□□□ 0.54
Abcd4O89016 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Abcd4O89016 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Abcd4O89016 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Abcd4O89016 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Abcd4O89016 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Abcd4O89016 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Abcd4O89016 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.44■□□□□ 0.54
Abcd4O89016 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Abcd4O89016 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.44■□□□□ 0.54
Abcd4O89016 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Abcd4O89016 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Abcd4O89016 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Abcd4O89016 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.44■□□□□ 0.54
Abcd4O89016 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Abcd4O89016 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Abcd4O89016 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Abcd4O89016 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Abcd4O89016 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Abcd4O89016 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Abcd4O89016 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.43■□□□□ 0.54
Abcd4O89016 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.43■□□□□ 0.54
Abcd4O89016 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Abcd4O89016 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Abcd4O89016 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Abcd4O89016 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Abcd4O89016 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Abcd4O89016 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Abcd4O89016 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Abcd4O89016 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Abcd4O89016 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Abcd4O89016 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Abcd4O89016 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Abcd4O89016 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Abcd4O89016 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Abcd4O89016 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Abcd4O89016 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.42■□□□□ 0.54
Abcd4O89016 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Abcd4O89016 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Abcd4O89016 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Abcd4O89016 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Abcd4O89016 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Abcd4O89016 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Abcd4O89016 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Abcd4O89016 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.41■□□□□ 0.54
Abcd4O89016 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Abcd4O89016 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Abcd4O89016 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Abcd4O89016 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Abcd4O89016 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Abcd4O89016 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Abcd4O89016 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Abcd4O89016 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Abcd4O89016 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms