Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sh2d1aO88890 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sh2d1aO88890 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Sh2d1aO88890 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh2d1aO88890 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh2d1aO88890 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh2d1aO88890 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Sh2d1aO88890 Gm13238-201ENSMUST00000117655 780 ntBASIC14.45□□□□□ -0.1
Sh2d1aO88890 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh2d1aO88890 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh2d1aO88890 Gm5921-201ENSMUST00000075898 882 ntBASIC14.45□□□□□ -0.1
Sh2d1aO88890 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sh2d1aO88890 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sh2d1aO88890 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sh2d1aO88890 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
Sh2d1aO88890 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sh2d1aO88890 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sh2d1aO88890 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC14.44□□□□□ -0.1
Sh2d1aO88890 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sh2d1aO88890 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sh2d1aO88890 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sh2d1aO88890 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Sh2d1aO88890 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC14.44□□□□□ -0.1
Sh2d1aO88890 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sh2d1aO88890 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sh2d1aO88890 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh2d1aO88890 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh2d1aO88890 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh2d1aO88890 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh2d1aO88890 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh2d1aO88890 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh2d1aO88890 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sh2d1aO88890 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC14.43□□□□□ -0.1
Sh2d1aO88890 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sh2d1aO88890 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC14.43□□□□□ -0.1
Sh2d1aO88890 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh2d1aO88890 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.43□□□□□ -0.1
Sh2d1aO88890 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Sh2d1aO88890 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Sh2d1aO88890 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh2d1aO88890 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sh2d1aO88890 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh2d1aO88890 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh2d1aO88890 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh2d1aO88890 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh2d1aO88890 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Sh2d1aO88890 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh2d1aO88890 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh2d1aO88890 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh2d1aO88890 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh2d1aO88890 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh2d1aO88890 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh2d1aO88890 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh2d1aO88890 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Sh2d1aO88890 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh2d1aO88890 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh2d1aO88890 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh2d1aO88890 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh2d1aO88890 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh2d1aO88890 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh2d1aO88890 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh2d1aO88890 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh2d1aO88890 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
Sh2d1aO88890 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh2d1aO88890 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Sh2d1aO88890 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh2d1aO88890 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC14.4□□□□□ -0.1
Sh2d1aO88890 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh2d1aO88890 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh2d1aO88890 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC14.4□□□□□ -0.1
Sh2d1aO88890 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh2d1aO88890 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh2d1aO88890 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC14.39□□□□□ -0.11
Sh2d1aO88890 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh2d1aO88890 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh2d1aO88890 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Sh2d1aO88890 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC14.39□□□□□ -0.11
Sh2d1aO88890 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sh2d1aO88890 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh2d1aO88890 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Sh2d1aO88890 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh2d1aO88890 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh2d1aO88890 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh2d1aO88890 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh2d1aO88890 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.38□□□□□ -0.11
Sh2d1aO88890 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh2d1aO88890 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sh2d1aO88890 AC116713.1-201ENSMUST00000215074 430 ntBASIC14.38□□□□□ -0.11
Sh2d1aO88890 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Sh2d1aO88890 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh2d1aO88890 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh2d1aO88890 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sh2d1aO88890 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh2d1aO88890 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC14.37□□□□□ -0.11
Sh2d1aO88890 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh2d1aO88890 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh2d1aO88890 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh2d1aO88890 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh2d1aO88890 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh2d1aO88890 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms