Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ClppO88696 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.91■□□□□ 0.78
ClppO88696 Gm12821-201ENSMUST00000120022 600 ntBASIC19.91■□□□□ 0.78
ClppO88696 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.91■□□□□ 0.78
ClppO88696 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.91■□□□□ 0.78
ClppO88696 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.91■□□□□ 0.78
ClppO88696 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ClppO88696 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
ClppO88696 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ClppO88696 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
ClppO88696 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.9■□□□□ 0.78
ClppO88696 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ClppO88696 Golgb1-201ENSMUST00000023534 498 ntBASIC19.9■□□□□ 0.78
ClppO88696 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ClppO88696 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ClppO88696 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ClppO88696 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ClppO88696 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ClppO88696 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.89■□□□□ 0.77
ClppO88696 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.89■□□□□ 0.77
ClppO88696 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ClppO88696 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
ClppO88696 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ClppO88696 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ClppO88696 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ClppO88696 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ClppO88696 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ClppO88696 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.88■□□□□ 0.77
ClppO88696 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ClppO88696 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ClppO88696 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
ClppO88696 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ClppO88696 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ClppO88696 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ClppO88696 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
ClppO88696 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.87■□□□□ 0.77
ClppO88696 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.87■□□□□ 0.77
ClppO88696 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ClppO88696 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ClppO88696 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ClppO88696 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ClppO88696 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ClppO88696 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.86■□□□□ 0.77
ClppO88696 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
ClppO88696 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ClppO88696 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ClppO88696 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ClppO88696 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.85■□□□□ 0.77
ClppO88696 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ClppO88696 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ClppO88696 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ClppO88696 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ClppO88696 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ClppO88696 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ClppO88696 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ClppO88696 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ClppO88696 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ClppO88696 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.84■□□□□ 0.77
ClppO88696 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ClppO88696 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ClppO88696 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ClppO88696 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.83■□□□□ 0.77
ClppO88696 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.83■□□□□ 0.77
ClppO88696 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.83■□□□□ 0.77
ClppO88696 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ClppO88696 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ClppO88696 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ClppO88696 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ClppO88696 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
ClppO88696 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ClppO88696 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ClppO88696 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ClppO88696 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ClppO88696 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.82■□□□□ 0.76
ClppO88696 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.81■□□□□ 0.76
ClppO88696 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ClppO88696 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ClppO88696 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ClppO88696 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ClppO88696 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ClppO88696 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ClppO88696 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ClppO88696 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ClppO88696 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ClppO88696 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ClppO88696 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ClppO88696 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.8■□□□□ 0.76
ClppO88696 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.8■□□□□ 0.76
ClppO88696 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
ClppO88696 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ClppO88696 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.8■□□□□ 0.76
ClppO88696 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ClppO88696 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ClppO88696 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ClppO88696 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ClppO88696 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
ClppO88696 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ClppO88696 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.79■□□□□ 0.76
ClppO88696 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ClppO88696 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms