Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf17O88472 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.29■□□□□ 0.68
Tnfrsf17O88472 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf17O88472 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf17O88472 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.28■□□□□ 0.68
Tnfrsf17O88472 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf17O88472 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf17O88472 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf17O88472 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf17O88472 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.28■□□□□ 0.68
Tnfrsf17O88472 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf17O88472 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf17O88472 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf17O88472 Gm10252-201ENSMUST00000209541 832 ntBASIC19.27■□□□□ 0.68
Tnfrsf17O88472 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfrsf17O88472 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Tnfrsf17O88472 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf17O88472 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf17O88472 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf17O88472 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf17O88472 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf17O88472 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.25■□□□□ 0.67
Tnfrsf17O88472 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf17O88472 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Tnfrsf17O88472 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.25■□□□□ 0.67
Tnfrsf17O88472 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf17O88472 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
Tnfrsf17O88472 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf17O88472 Gm10653-202ENSMUST00000139570 835 ntBASIC19.25■□□□□ 0.67
Tnfrsf17O88472 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf17O88472 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf17O88472 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf17O88472 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.24■□□□□ 0.67
Tnfrsf17O88472 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf17O88472 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Tnfrsf17O88472 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.24■□□□□ 0.67
Tnfrsf17O88472 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf17O88472 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf17O88472 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf17O88472 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf17O88472 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Tnfrsf17O88472 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf17O88472 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfrsf17O88472 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Tnfrsf17O88472 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfrsf17O88472 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfrsf17O88472 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.23■□□□□ 0.67
Tnfrsf17O88472 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.23■□□□□ 0.67
Tnfrsf17O88472 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfrsf17O88472 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf17O88472 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.22■□□□□ 0.67
Tnfrsf17O88472 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf17O88472 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.22■□□□□ 0.67
Tnfrsf17O88472 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf17O88472 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.22■□□□□ 0.67
Tnfrsf17O88472 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf17O88472 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Tnfrsf17O88472 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Tnfrsf17O88472 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfrsf17O88472 Gm12441-201ENSMUST00000121806 588 ntBASIC19.21■□□□□ 0.67
Tnfrsf17O88472 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.21■□□□□ 0.67
Tnfrsf17O88472 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.21■□□□□ 0.67
Tnfrsf17O88472 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfrsf17O88472 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.21■□□□□ 0.67
Tnfrsf17O88472 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfrsf17O88472 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf17O88472 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf17O88472 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf17O88472 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Tnfrsf17O88472 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.2■□□□□ 0.66
Tnfrsf17O88472 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf17O88472 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.19■□□□□ 0.66
Tnfrsf17O88472 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf17O88472 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.19■□□□□ 0.66
Tnfrsf17O88472 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Tnfrsf17O88472 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Tnfrsf17O88472 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.19■□□□□ 0.66
Tnfrsf17O88472 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf17O88472 Gm22240-201ENSMUST00000175225 82 ntBASIC19.18■□□□□ 0.66
Tnfrsf17O88472 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.18■□□□□ 0.66
Tnfrsf17O88472 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Tnfrsf17O88472 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf17O88472 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf17O88472 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf17O88472 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Tnfrsf17O88472 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfrsf17O88472 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfrsf17O88472 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfrsf17O88472 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfrsf17O88472 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfrsf17O88472 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf17O88472 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf17O88472 Gm43530-201ENSMUST00000195920 274 ntBASIC19.16■□□□□ 0.66
Tnfrsf17O88472 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.16■□□□□ 0.66
Tnfrsf17O88472 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf17O88472 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.16■□□□□ 0.66
Tnfrsf17O88472 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Tnfrsf17O88472 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf17O88472 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
Tnfrsf17O88472 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms