Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh16O88338 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh16O88338 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh16O88338 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh16O88338 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh16O88338 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Cdh16O88338 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.05■□□□□ 0.8
Cdh16O88338 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.05■□□□□ 0.8
Cdh16O88338 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Cdh16O88338 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh16O88338 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh16O88338 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh16O88338 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh16O88338 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh16O88338 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh16O88338 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh16O88338 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh16O88338 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Cdh16O88338 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.04■□□□□ 0.8
Cdh16O88338 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh16O88338 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Cdh16O88338 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh16O88338 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Cdh16O88338 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdh16O88338 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Cdh16O88338 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdh16O88338 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.03■□□□□ 0.8
Cdh16O88338 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdh16O88338 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Cdh16O88338 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdh16O88338 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Cdh16O88338 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdh16O88338 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdh16O88338 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdh16O88338 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdh16O88338 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdh16O88338 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cdh16O88338 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cdh16O88338 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
Cdh16O88338 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdh16O88338 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdh16O88338 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.01■□□□□ 0.79
Cdh16O88338 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdh16O88338 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdh16O88338 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdh16O88338 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdh16O88338 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.01■□□□□ 0.79
Cdh16O88338 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cdh16O88338 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cdh16O88338 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Cdh16O88338 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cdh16O88338 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20■□□□□ 0.79
Cdh16O88338 Gm5987-201ENSMUST00000196433 1151 ntBASIC20■□□□□ 0.79
Cdh16O88338 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdh16O88338 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdh16O88338 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdh16O88338 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20■□□□□ 0.79
Cdh16O88338 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cdh16O88338 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cdh16O88338 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdh16O88338 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdh16O88338 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cdh16O88338 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdh16O88338 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cdh16O88338 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdh16O88338 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cdh16O88338 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.98■□□□□ 0.79
Cdh16O88338 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.98■□□□□ 0.79
Cdh16O88338 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdh16O88338 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.98■□□□□ 0.79
Cdh16O88338 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdh16O88338 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdh16O88338 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.98■□□□□ 0.79
Cdh16O88338 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdh16O88338 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdh16O88338 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdh16O88338 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdh16O88338 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.97■□□□□ 0.79
Cdh16O88338 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdh16O88338 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cdh16O88338 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdh16O88338 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Cdh16O88338 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.97■□□□□ 0.79
Cdh16O88338 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cdh16O88338 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdh16O88338 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdh16O88338 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh16O88338 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh16O88338 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh16O88338 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Cdh16O88338 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.96■□□□□ 0.79
Cdh16O88338 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cdh16O88338 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh16O88338 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Cdh16O88338 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Cdh16O88338 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh16O88338 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Cdh16O88338 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdh16O88338 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdh16O88338 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms