Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
Ubr1O70481 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Ubr1O70481 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Ubr1O70481 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Ubr1O70481 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Ubr1O70481 Gm6085-201ENSMUST00000182774 1470 ntBASIC27.33■■□□□ 1.97
Ubr1O70481 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Ubr1O70481 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Ubr1O70481 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Ubr1O70481 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC27.32■■□□□ 1.96
Ubr1O70481 Gm7160-202ENSMUST00000188519 1027 ntBASIC27.32■■□□□ 1.96
Ubr1O70481 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC27.32■■□□□ 1.96
Ubr1O70481 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC27.31■■□□□ 1.96
Ubr1O70481 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Ubr1O70481 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Ubr1O70481 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Ubr1O70481 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Ubr1O70481 AC166356.1-201ENSMUST00000228236 1426 ntBASIC27.31■■□□□ 1.96
Ubr1O70481 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
Ubr1O70481 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Ubr1O70481 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC27.3■■□□□ 1.96
Ubr1O70481 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ubr1O70481 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ubr1O70481 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
Ubr1O70481 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
Ubr1O70481 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Ubr1O70481 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ubr1O70481 Gm26571-201ENSMUST00000181399 666 ntBASIC27.29■■□□□ 1.96
Ubr1O70481 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ubr1O70481 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC27.28■■□□□ 1.96
Ubr1O70481 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ubr1O70481 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Ubr1O70481 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ubr1O70481 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC27.27■■□□□ 1.96
Ubr1O70481 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
Ubr1O70481 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
Ubr1O70481 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Ubr1O70481 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC27.27■■□□□ 1.96
Ubr1O70481 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
Ubr1O70481 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Ubr1O70481 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC27.25■■□□□ 1.95
Ubr1O70481 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
Ubr1O70481 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ubr1O70481 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ubr1O70481 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ubr1O70481 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC27.24■■□□□ 1.95
Ubr1O70481 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Ubr1O70481 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ubr1O70481 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ubr1O70481 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
Ubr1O70481 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC27.24■■□□□ 1.95
Ubr1O70481 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ubr1O70481 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ubr1O70481 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC27.24■■□□□ 1.95
Ubr1O70481 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Ubr1O70481 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Ubr1O70481 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Ubr1O70481 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
Ubr1O70481 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC27.23■■□□□ 1.95
Ubr1O70481 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Ubr1O70481 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Ubr1O70481 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Ubr1O70481 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
Ubr1O70481 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Ubr1O70481 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Ubr1O70481 AC164629.5-201ENSMUST00000220387 632 ntBASIC27.22■■□□□ 1.95
Ubr1O70481 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ubr1O70481 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC27.21■■□□□ 1.95
Ubr1O70481 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC27.21■■□□□ 1.95
Ubr1O70481 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Ubr1O70481 Gm26833-201ENSMUST00000180899 440 ntBASIC27.2■■□□□ 1.95
Ubr1O70481 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Ubr1O70481 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
Ubr1O70481 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Ubr1O70481 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Ubr1O70481 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Ubr1O70481 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Ubr1O70481 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Ubr1O70481 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
Ubr1O70481 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Ubr1O70481 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Ubr1O70481 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Ubr1O70481 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Ubr1O70481 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
Ubr1O70481 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Ubr1O70481 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Ubr1O70481 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC27.17■■□□□ 1.94
Ubr1O70481 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Ubr1O70481 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Ubr1O70481 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Ubr1O70481 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Ubr1O70481 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Ubr1O70481 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Ubr1O70481 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC27.17■■□□□ 1.94
Ubr1O70481 Cdc34b-202ENSMUST00000188741 1252 ntBASIC27.17■■□□□ 1.94
Ubr1O70481 Gm5297-201ENSMUST00000198555 1171 ntBASIC27.17■■□□□ 1.94
Ubr1O70481 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Ubr1O70481 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
Ubr1O70481 Gm40848-201ENSMUST00000221998 324 ntBASIC27.17■■□□□ 1.94
Ubr1O70481 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms