Protein–RNA interactions for Protein: O70479

Tnfaip1, BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip1O70479 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tnfaip1O70479 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tnfaip1O70479 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Tnfaip1O70479 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.87■■□□□ 1.09
Tnfaip1O70479 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.86■■□□□ 1.09
Tnfaip1O70479 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.86■■□□□ 1.09
Tnfaip1O70479 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tnfaip1O70479 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tnfaip1O70479 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tnfaip1O70479 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tnfaip1O70479 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tnfaip1O70479 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Tnfaip1O70479 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tnfaip1O70479 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tnfaip1O70479 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tnfaip1O70479 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tnfaip1O70479 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.84■■□□□ 1.09
Tnfaip1O70479 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Tnfaip1O70479 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.83■■□□□ 1.09
Tnfaip1O70479 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.83■■□□□ 1.09
Tnfaip1O70479 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Tnfaip1O70479 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Tnfaip1O70479 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Tnfaip1O70479 Gm42569-201ENSMUST00000200539 472 ntBASIC21.83■■□□□ 1.09
Tnfaip1O70479 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Tnfaip1O70479 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tnfaip1O70479 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tnfaip1O70479 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Tnfaip1O70479 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.82■■□□□ 1.08
Tnfaip1O70479 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.82■■□□□ 1.08
Tnfaip1O70479 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.82■■□□□ 1.08
Tnfaip1O70479 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Tnfaip1O70479 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tnfaip1O70479 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
Tnfaip1O70479 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tnfaip1O70479 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tnfaip1O70479 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Tnfaip1O70479 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tnfaip1O70479 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tnfaip1O70479 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.81■■□□□ 1.08
Tnfaip1O70479 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Tnfaip1O70479 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.81■■□□□ 1.08
Tnfaip1O70479 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.81■■□□□ 1.08
Tnfaip1O70479 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.81■■□□□ 1.08
Tnfaip1O70479 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
Tnfaip1O70479 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.81■■□□□ 1.08
Tnfaip1O70479 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.81■■□□□ 1.08
Tnfaip1O70479 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tnfaip1O70479 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tnfaip1O70479 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tnfaip1O70479 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tnfaip1O70479 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tnfaip1O70479 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.8■■□□□ 1.08
Tnfaip1O70479 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.8■■□□□ 1.08
Tnfaip1O70479 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.8■■□□□ 1.08
Tnfaip1O70479 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.8■■□□□ 1.08
Tnfaip1O70479 Gm40848-201ENSMUST00000221998 324 ntBASIC21.8■■□□□ 1.08
Tnfaip1O70479 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.8■■□□□ 1.08
Tnfaip1O70479 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tnfaip1O70479 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tnfaip1O70479 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tnfaip1O70479 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.8■■□□□ 1.08
Tnfaip1O70479 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tnfaip1O70479 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tnfaip1O70479 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tnfaip1O70479 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tnfaip1O70479 Gm27405-201ENSMUST00000184201 112 ntBASIC21.79■■□□□ 1.08
Tnfaip1O70479 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.79■■□□□ 1.08
Tnfaip1O70479 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tnfaip1O70479 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Tnfaip1O70479 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tnfaip1O70479 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Tnfaip1O70479 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tnfaip1O70479 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tnfaip1O70479 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tnfaip1O70479 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Tnfaip1O70479 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Tnfaip1O70479 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Tnfaip1O70479 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.77■■□□□ 1.08
Tnfaip1O70479 Gm42642-201ENSMUST00000200683 355 ntBASIC21.77■■□□□ 1.08
Tnfaip1O70479 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tnfaip1O70479 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tnfaip1O70479 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Tnfaip1O70479 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Tnfaip1O70479 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.76■■□□□ 1.07
Tnfaip1O70479 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tnfaip1O70479 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tnfaip1O70479 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Tnfaip1O70479 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tnfaip1O70479 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tnfaip1O70479 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tnfaip1O70479 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tnfaip1O70479 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Tnfaip1O70479 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tnfaip1O70479 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.75■■□□□ 1.07
Tnfaip1O70479 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Tnfaip1O70479 Gm26571-201ENSMUST00000181399 666 ntBASIC21.75■■□□□ 1.07
Tnfaip1O70479 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.75■■□□□ 1.07
Tnfaip1O70479 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.75■■□□□ 1.07
Tnfaip1O70479 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms